PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919955.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 299aa    MW: 34824.6 Da    PI: 8.1197
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-17956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd ll+++++++G g W++++   g++R++k+c++rw++yl
   XP_023919955.1  9 KGAWTEEEDILLKQCIQKYGEGKWHLVPVSAGLNRCRKSCRLRWLNYL 56
                     79********************************************97 PP
2Myb_DNA-binding44.73.2e-1462107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++ ++E +l ++++k+lG++ W++Ia +++ gRt++++k++w+++l
   XP_023919955.1  62 RGNFAADEVDLMLRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 107
                      79999*****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEGSFGVRKG AWTEEEDILL KQCIQKYGEG KWHLVPVSAG LNRCRKSCRL RWLNYLKPNI  60
KRGNFAADEV DLMLRLHKLL GNRWSLIAGR LPGRTANDVK NYWNTHLLRK GSSHITKLKE  120
KPQDMVKVNV IKPQPRTFSK NLTWLSGKPA IVGSFQKKED MRDISQTPMK SESRINWGES  180
FQRKEDMRDI SQTPTQSESR INWWESFQKK EDMRDISQTP MQSESRINWW ESLSNCGELD  240
ERATCTQCGR LNEVPKETFW AEEIVPEAKV VGDTLDEDVL NFWGDLSFDM DLWEVLNAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.14e-67MYB family protein