PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 34826.6 Da PI: 8.2032 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.4e-17 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd ll+++++++G g W++++ g++R++k+c++rw++yl XP_023919951.1 9 KGAWSEEEDILLKQCIQKYGEGKWHLVPDSAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.2e-14 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E +l ++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_023919951.1 62 RGNFAADEVDLMLRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 107 79999*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MEGSFGVRKG AWSEEEDILL KQCIQKYGEG KWHLVPDSAG LNRCRKSCRL RWLNYLKPNI 60 KRGNFAADEV DLMLRLHKLL GNRWSLIAGR LPGRTANDVK NYWNTHLLKK GSSHITKLKE 120 KPQDMVKVNV IKPQPRILSK NLTWLSGKPA IVGSFQKKED IRDISQTSMQ SVSRINWWES 180 FQKKEDMRGI SQTPTQSESR INWWESFQKK EDMRDISQTP MQSESRINWW ESLSNCGELD 240 ERATCTQRGR LNEEPKETFW AEEIVPEAKV VGDTLDEDVL NYWGDLSLDM DLWEVLNAE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 7e-65 | MYB family protein |