PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919949.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 106aa    MW: 12242.2 Da    PI: 9.9341
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.5e-14956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W +eEd +l++++++ G g W+++   +g++R++k+c++rw++yl
   XP_023919949.1  9 KGAWIEEEDIRLKQCIEKDGEGKWHLVLVSVGLNRCRKSCRLRWLNYL 56
                     799********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MDGSFSVRKG AWIEEEDIRL KQCIEKDGEG KWHLVLVSVG LNRCRKSCRL RWLNYLKPNI  60
KRGNFAADEV DLMLKLHKLL GDRQVSLANN NNSKHIMSLV KTTEAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-37MYB family protein