PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919942.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 833aa MW: 91211.1 Da PI: 6.1763 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.5 | 2.3e-18 | 5 | 63 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+++ ++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ XP_023919942.1 5 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 63 6789*****************************************************97 PP | |||||||
2 | START | 177.3 | 8.9e-56 | 154 | 361 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 +aee+++e+++ka+ ++ Wv++ +++g++++ +++ s+++sg a+ra+g+v +++ v+e+l+ ++ W ++++++++l +i +g g+++l+ XP_023919942.1 154 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKERLSWFRDCRSIDVLSAIPTGngGTIELI 247 68999*****************************************************.8888888888************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185 +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s + p + s+vRae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+l+ XP_023919942.1 248 YMQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPAgppTTSFVRAEVLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLY 342 ***************************************999998888*********************************************** PP HHHHHHHHHHHHHHTXXXX CS START 186 ksglaegaktwvatlqrqc 204 +s+ + ++k++va+l++ + XP_023919942.1 343 ESSKILAQKMTVAALRHIR 361 ***************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 833 aa Download sequence |
MDSSKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR 60 EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSHLVY ENGYMRQQLQ SASGTTTDNS 120 CESVVMSGQQ QQQQNPTPQH PQRDANNPAG LLAIAEETLA EFLSKATGTA VDWVQMIGMK 180 PGPDSIGIVA VSRNCSGVAA RACGLVSLEP TKVAEILKER LSWFRDCRSI DVLSAIPTGN 240 GGTIELIYMQ TYAPTTLAAA RDFWTLRYTT SLEDGSLVIC ERSLTSSTGG PAGPPTTSFV 300 RAEVLPSGYL IRPCEGGGSI IHIVDHVDLD AWSVPEVLRP LYESSKILAQ KMTVAALRHI 360 RQIAQESSGE IQYGGGRQPA VLRTFSQRLC RGFNDAVNGF ADDGWSLMGS DGVEDVTIMI 420 NSSPNKFLGS QYSTSMFSTF GGGVLCAKAS MLLQNVPPAL LVRFLREHRS EWADYGVDAY 480 SAACLKASPY AVPCARPGGF PGSQVILPLA HTVEHEEFLE VVRLEGHAFS PEDVALARDM 540 YLLQLCSGVD ENAVGACAQL VFAPIDESFA DDAPLLPSGF RVIPLDPKPD GPAATRTLDL 600 ASTLEVGAGG ARPAGEADLN GYNLRSVLTI AFQFTFESHL RDNVAAMARQ YVRSVVGSVQ 660 RVAMAISPSR LSSHMGPKPL PGSPEALTLA RWICRSYRIH TGGELFRVES QASDAILKQL 720 WLHSDAILCC SVKTNASPVF TFANQAGLDM LETTLVALQD IMLDKILDEA GRKILCSEFS 780 KIMQQGFAYL PAGICLSSMG RPVSYEQAIA WKVLNDDDSN HCLAFMFLNW SFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 0.0 | HD-ZIP family protein |