PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919942.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HD-ZIP
Protein Properties Length: 833aa    MW: 91211.1 Da    PI: 6.1763
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.52.3e-18563357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_023919942.1  5 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 63
                    6789*****************************************************97 PP

2START177.38.9e-561543612204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+ ++ W ++++++++l +i +g  g+++l+
  XP_023919942.1 154 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKERLSWFRDCRSIDVLSAIPTGngGTIELI 247
                     68999*****************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p    + s+vRae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+l+
  XP_023919942.1 248 YMQTYAPTTLAAaRDFWTLRYTTSLEDGSLVICERSLTSSTGGPAgppTTSFVRAEVLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLY 342
                     ***************************************999998888*********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++va+l++ +
  XP_023919942.1 343 ESSKILAQKMTVAALRHIR 361
                     ***************9865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 833 aa     Download sequence    
MDSSKYVRYT PEQVEALERV YTECPKPSSL RRQQLIRECP ILSNIEPKQI KVWFQNRRCR  60
EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSHLVY ENGYMRQQLQ SASGTTTDNS  120
CESVVMSGQQ QQQQNPTPQH PQRDANNPAG LLAIAEETLA EFLSKATGTA VDWVQMIGMK  180
PGPDSIGIVA VSRNCSGVAA RACGLVSLEP TKVAEILKER LSWFRDCRSI DVLSAIPTGN  240
GGTIELIYMQ TYAPTTLAAA RDFWTLRYTT SLEDGSLVIC ERSLTSSTGG PAGPPTTSFV  300
RAEVLPSGYL IRPCEGGGSI IHIVDHVDLD AWSVPEVLRP LYESSKILAQ KMTVAALRHI  360
RQIAQESSGE IQYGGGRQPA VLRTFSQRLC RGFNDAVNGF ADDGWSLMGS DGVEDVTIMI  420
NSSPNKFLGS QYSTSMFSTF GGGVLCAKAS MLLQNVPPAL LVRFLREHRS EWADYGVDAY  480
SAACLKASPY AVPCARPGGF PGSQVILPLA HTVEHEEFLE VVRLEGHAFS PEDVALARDM  540
YLLQLCSGVD ENAVGACAQL VFAPIDESFA DDAPLLPSGF RVIPLDPKPD GPAATRTLDL  600
ASTLEVGAGG ARPAGEADLN GYNLRSVLTI AFQFTFESHL RDNVAAMARQ YVRSVVGSVQ  660
RVAMAISPSR LSSHMGPKPL PGSPEALTLA RWICRSYRIH TGGELFRVES QASDAILKQL  720
WLHSDAILCC SVKTNASPVF TFANQAGLDM LETTLVALQD IMLDKILDEA GRKILCSEFS  780
KIMQQGFAYL PAGICLSSMG RPVSYEQAIA WKVLNDDDSN HCLAFMFLNW SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein