PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NF-YA | ||||||||
Protein Properties | Length: 187aa MW: 20615.9 Da PI: 8.4288 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 102.5 | 3.9e-32 | 113 | 169 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+e+k +ksrkpylheSRh hAlrR+Rg+gGrF XP_023919940.1 113 EEPVFVNAKQYHGILRRRQSRAKAESEHKA-IKSRKPYLHESRHLHALRRARGCGGRF 169 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MTSSVNDLSD NSEADEQQKH SESQIHSSSP ITGMSHPGVT TSNVQYPTPP QLGAGPAMGP 60 AAYPYPDPYY RSIFAPYDAQ PYPPQPYGGQ PMVHLQLMGI QQAGVPLPSD AVEEPVFVNA 120 KQYHGILRRR QSRAKAESEH KAIKSRKPYL HESRHLHALR RARGCGGRFL NSKKDENQQN 180 EVASGDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 4e-54 | NF-YA family protein |