PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919473.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 266aa MW: 28950.2 Da PI: 10.0478 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.5 | 4.8e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI R+ ++k++w++ XP_023919473.1 5 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfsgilHLRSNVDLKDKWRN 55 79***********************************88***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILTDPEFSGI LHLRSNVDLK DKWRNINVTA 60 IWGSRQKAKL ALKRDLPTPK LDDNPISLIT VPQSDAETVD AKPLVLSRGA LQTADSKEPF 120 ARLDKLILEA ITNLKEPRGS DRAAIALYIE IKHKYRIASS STFSEKRRSS SLLVVEERQK 180 DSSRAEKREI NILTKTQVDA ELSKMKGMTA QEAAAAAARA VAEAEAAIAE AEKAAREAEA 240 AEAEAEAAQV FAKAAMKALK CGTLRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67580.1 | 4e-64 | MYB_related family protein |