PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919471.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 295aa    MW: 32412.3 Da    PI: 10.3858
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.35.6e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI            R+  ++k++w++
   XP_023919471.1  5 KQKWTAEEEAALKAGVLKHGAGKWRTILTDPEfsgilHLRSNVDLKDKWRN 55
                     79*****************************9*****88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILTDPEFSGI LHLRSNVDLK DKWRNINVTA  60
IWGSRQKAKL ALKRDLPTPK LDDNPISLIT VPQSDAETVD AKPLVLSRGA LQTADSKEPF  120
ARLDKLILEA ITNLKEPRGS DRAAIALYIE ERYWAPPNLK KLLSTKLKHM SANGRLIKIK  180
HKYRIASSST FSEKRRSSSL LVVEERQKDS SRAEKREINI LTKTQVDAEL SKMKGMTAQE  240
AAAAAARAVA EAEAAIAEAE KAAREAEAAE AEAEAAQVFA KAAMKALKCG TLRAW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.12e-81MYB_related family protein