PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919208.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 914aa MW: 102514 Da PI: 9.7106 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1e-08 | 228 | 272 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WTt Ed+ l+ +v++ G +W Ia +g+ Rt+ qc r+q XP_023919208.1 228 NPWTTMEDKNLLLLVQEKGIINWFDIAVSLGTDRTPFQCLARYQR 272 69*****************************************96 PP | |||||||
2 | Myb_DNA-binding | 39.4 | 1.4e-12 | 280 | 324 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT++Ed +l av+ +G +W ++a+t+ gR + qc +rw k XP_023919208.1 280 KGAWTKDEDAQLCAAVEVFGESDWQSVASTLE-GRAGTQCSNRWKK 324 79******************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 48.9 | 1.5e-15 | 334 | 377 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grW ++Ed++l+ av ++G+++W++Ia+ ++ gRt qc++rw + XP_023919208.1 334 GRWIEDEDKRLKVAVMLFGPKNWNKIAQFVP-GRTQVQCRERWVN 377 89*****************************.***********87 PP | |||||||
4 | Myb_DNA-binding | 49.7 | 8.3e-16 | 387 | 430 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd +l+ a++++G W+++a++++ Rt++qc+ rw +l XP_023919208.1 387 EWTEEEDSKLKAAIAEHGYC-WAKVAACVP-PRTDNQCRRRWKVLL 430 6*****************99.*********.9**********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 914 aa Download sequence |
MLPLKKSSFP KSALLLMDAI KKNRSSQKFI RSQLVNLEAR IEENKKLKER VKILKDFQAS 60 CKKRTGRALS QRKDPRVQLI SVKKSLVSKD SKVNDKRVHA MYYGPAENSH VTNYRMALTT 120 FPLSLERKKW SKAERENLGK GIRQQFQEMV LQISVDQLSD LDGSCGDSND FDKILVSIKD 180 LEVTPENLRE FLPKVNWEQL ASMYVVGRSG AECEVRWLNY EDPLINHNPW TTMEDKNLLL 240 LVQEKGIINW FDIAVSLGTD RTPFQCLARY QRSLNASILK GAWTKDEDAQ LCAAVEVFGE 300 SDWQSVASTL EGRAGTQCSN RWKKSLHPAR ERVGRWIEDE DKRLKVAVML FGPKNWNKIA 360 QFVPGRTQVQ CRERWVNSLD PSLSWSEWTE EEDSKLKAAI AEHGYCWAKV AACVPPRTDN 420 QCRRRWKVLL PHEVPMLKEA RRIQKAALIS NFVDREVERP ALGPSDFLPL PMIGSISEPE 480 NKNSCSKQKG RLRGKATSKE KKNAASCNVP RKNRFKKCEQ QSQVCSGTIE KKKHPKPCSK 540 RKKCIKPVAD NQSLVLLPES LESGTTNGEC VEAAIDNNST SNKKTSKHCS RRIKCTTDLG 600 GNQNAMLSSA KSMLSGITND EHPLDHVSCP DSTLLPITNG EVVDSMNEHV RTGKQRPTKL 660 QSKRKKCMEL AEDSHSFSSH PESGEFGKTD GEGVESSILD MGKGAVKQQK RRKIRNEPSG 720 KCQDVSVLFQ QDKLEVSKHR NISSKQILGA TNGDDVTLAC FLHNKPKKRR LEVAKNTSQA 780 CSSSSPKKGV ESLSNVADKL KYGNQNLSTT QDKESQAFCL GGNPDDLLPC KLSSHLVDKP 840 TMIDSDNGPD RKDLVQGQHT AHDPVSFSPE GDCEEDGDIT LACLLQNKLK KKKGSKSISR 900 VNRHNDGNPS NMQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.2 | 0.0 | MYB family protein |