PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919207.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 1121aa MW: 125168 Da PI: 8.0509 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.7 | 1.3e-08 | 435 | 479 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++WTt Ed+ l+ +v++ G +W Ia +g+ Rt+ qc r+q XP_023919207.1 435 NPWTTMEDKNLLLLVQEKGIINWFDIAVSLGTDRTPFQCLARYQR 479 69*****************************************96 PP | |||||||
2 | Myb_DNA-binding | 39.1 | 1.7e-12 | 487 | 531 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT++Ed +l av+ +G +W ++a+t+ gR + qc +rw k XP_023919207.1 487 KGAWTKDEDAQLCAAVEVFGESDWQSVASTLE-GRAGTQCSNRWKK 531 79******************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 48.5 | 2e-15 | 541 | 584 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grW ++Ed++l+ av ++G+++W++Ia+ ++ gRt qc++rw + XP_023919207.1 541 GRWIEDEDKRLKVAVMLFGPKNWNKIAQFVP-GRTQVQCRERWVN 584 89*****************************.***********87 PP | |||||||
4 | Myb_DNA-binding | 49.4 | 1.1e-15 | 594 | 637 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd +l+ a++++G W+++a++++ Rt++qc+ rw +l XP_023919207.1 594 EWTEEEDSKLKAAIAEHGYC-WAKVAACVP-PRTDNQCRRRWKVLL 637 6*****************99.*********.9**********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1121 aa Download sequence |
MSPRTDQEKA EFTDDDNDDD DDVLDDDIEA LRRACMITGE NPNDLINNNN NNNNNNPSPS 60 LFSAAAGDDD SDDDLELVRS IQNRFSNSDT LSLKPLCTLP PMASDDDEDD LETLRAIQQR 120 FAAYDSDTLK QGIGFGGSLS KPQQQVDASS LSLEKETSNN LIVHRTNSSE GFTDSEDFCN 180 THPLSENLGI QPSSFVENHQ PGASKSPMLP LKKSSFPKSA LLLMDAIKKN RSSQKFIRSQ 240 LVNLEARIEE NKKLKERVKI LKDFQASCKK RTGRALSQRK DPRVQLISVK KSLVSKDSKV 300 NDKRVHAMYY GPAENSHVTN YRMALTTFPL SLERKKWSKA ERENLGKGIR QQFQEMVLQI 360 SVDQLSDLDG SCGDSNDFDK ILVSIKDLEV TPENLREFLP KVNWEQLASM YVVGRSGAEC 420 EVRWLNYEDP LINHNPWTTM EDKNLLLLVQ EKGIINWFDI AVSLGTDRTP FQCLARYQRS 480 LNASILKGAW TKDEDAQLCA AVEVFGESDW QSVASTLEGR AGTQCSNRWK KSLHPARERV 540 GRWIEDEDKR LKVAVMLFGP KNWNKIAQFV PGRTQVQCRE RWVNSLDPSL SWSEWTEEED 600 SKLKAAIAEH GYCWAKVAAC VPPRTDNQCR RRWKVLLPHE VPMLKEARRI QKAALISNFV 660 DREVERPALG PSDFLPLPMI GSISEPENKN SCSKQKGRLR GKATSKEKKN AASCNVPRKN 720 RFKKCEQQSQ VCSGTIEKKK HPKPCSKRKK CIKPVADNQS LVLLPESLES GTTNGECVEA 780 AIDNNSTSNK KTSKHCSRRI KCTTDLGGNQ NAMLSSAKSM LSGITNDEHP LDHVSCPDST 840 LLPITNGEVV DSMNEHVRTG KQRPTKLQSK RKKCMELAED SHSFSSHPES GEFGKTDGEG 900 VESSILDMGK GAVKQQKRRK IRNEPSGKCQ DVSVLFQQDK LEVSKHRNIS SKQILGATNG 960 DDVTLACFLH NKPKKRRLEV AKNTSQACSS SSPKKGVESL SNVADKLKYG NQNLSTTQDK 1020 ESQAFCLGGN PDDLLPCKLS SHLVDKPTMI DSDNGPDRKD LVQGQHTAHD PVSFSPEGDC 1080 EEDGDITLAC LLQNKLKKKK GSKSISRVNR HNDGNPSNMQ G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.1 | 0.0 | MYB family protein |