PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919192.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 293aa    MW: 32871.4 Da    PI: 7.569
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919192.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP70.32.2e-2258136471
         E2F_TDP   4 ksLrlltqkflklleksee.givtlnevakeLvse..............dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                      +Lr+++     +++k ++  ++t+n+va+e++++              d+kn+rRR+YD+lNVL+a+++i++ +k+ei wkg
  XP_023919192.1  58 GGLRQFSVI---VCQKLQSkVRTTYNQVADEIIADfagtqsdtvvplesDEKNIRRRVYDALNVLMAMDIIAR-DKKEIWWKG 136
                     589999999...****999899***************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSSGGVPGGA PTKIINVGAS CKSNHGMNHT ASHQENACNN AVVERAAKKK RESRIIGGGL  60
RQFSVIVCQK LQSKVRTTYN QVADEIIADF AGTQSDTVVP LESDEKNIRR RVYDALNVLM  120
AMDIIARDKK EIWWKGLPET NMKDLEELKA LRVEMMNRIG KKVAYMKDIE EQIVGLQNLM  180
ARNRQLLECG SASPEGRFSL PFLLVQTTPH ATVEIEISED MQLVHFDFNS SPFSLHDDAY  240
VLKMMRYNQQ PECRDVSPSS FVQSSSSSGT SQGTKPFHWN SETHSEMNIY WKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.15e-90E2F/DP family protein