PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023919077.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 374aa    MW: 40169.6 Da    PI: 9.2204
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023919077.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP139.59.4e-4477152176
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 
                     +CqvegC+adls+ak y++rhkvC +hsk+p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+
  XP_023919077.1  77 RCQVEGCKADLSDAKAYYSRHKVCGMHSKSPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 152
                     6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MEMGSGSLAD SSGGSSSSSP PNSSTDSLNG LKFGRKIYFE DAPPGPVAPA KPGDGPESTP  60
PKKVRGGGGA VGAQQPRCQV EGCKADLSDA KAYYSRHKVC GMHSKSPKVI VAGIEQRFCQ  120
QCSRFHQLPE FDQGKRSCRR RLAGHNERRR KPPPGSLLSS RFGRLSSSIF ETSSRGFLMD  180
FTAYPRHSGR DAWPTARSEQ MPANPSATSM EKFVPHPWQN TTENPPSDLY LQGSASGTSY  240
PGPGIPPGAF TGVTDSNCAL SLLSNQTWGS RNRASGLGVK DLMNTEGASM SQPMAPNGAV  300
INQFQSSSWG FKGNEAGSSS HEMPPDLGLG QISQPLNSQF SGELELPQQG RRQYMALEHS  360
RAYDTSPQQM HWSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.19e-65SBP family protein