PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023919077.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 374aa MW: 40169.6 Da PI: 9.2204 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 139.5 | 9.4e-44 | 77 | 152 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC+adls+ak y++rhkvC +hsk+p+v+v+g+eqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_023919077.1 77 RCQVEGCKADLSDAKAYYSRHKVCGMHSKSPKVIVAGIEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 152 6*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence |
MEMGSGSLAD SSGGSSSSSP PNSSTDSLNG LKFGRKIYFE DAPPGPVAPA KPGDGPESTP 60 PKKVRGGGGA VGAQQPRCQV EGCKADLSDA KAYYSRHKVC GMHSKSPKVI VAGIEQRFCQ 120 QCSRFHQLPE FDQGKRSCRR RLAGHNERRR KPPPGSLLSS RFGRLSSSIF ETSSRGFLMD 180 FTAYPRHSGR DAWPTARSEQ MPANPSATSM EKFVPHPWQN TTENPPSDLY LQGSASGTSY 240 PGPGIPPGAF TGVTDSNCAL SLLSNQTWGS RNRASGLGVK DLMNTEGASM SQPMAPNGAV 300 INQFQSSSWG FKGNEAGSSS HEMPPDLGLG QISQPLNSQF SGELELPQQG RRQYMALEHS 360 RAYDTSPQQM HWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42200.1 | 9e-65 | SBP family protein |