PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918802.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 423aa    MW: 48066 Da    PI: 7.6148
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.31.1e-3196200199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_023918802.1  96 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGK 190
                     89***************************966778999*************************************************66699999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_023918802.1 191 DRLFIDWRRR 200
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    
MNFGAHREGF CEEAEHMVMM RGKLPFSYSS SSSHDASDVK QQLELMESSP RNEDDLDDVG  60
QNGLAPTGAV TGSGSTSGTS SSTGMMMMMM EREHMFDKVV TPSDVGKLNR LVIPKQHAEK  120
YFPLDSSTNE KGLLLNFEDR NGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS  180
FQRGVGELGK DRLFIDWRRR PDAPDPNLSF PLPLHHHHHF STYHHQAWSP LQMRPPPRDR  240
VHIPHHLNYN NNNNLNLNLH HHPHPHPYRN TTPYCNVVNP YCSGSLIYLR SAATVSQQQH  300
HQQQQQQQQQ QQHQQQQLVQ MRSGVETPMV FESVPVVQGK VAAKKLRLFG VNMECPISET  360
DECDILSSTT IAHTSMPSQP STLLSSSSQS PLQLRLYNGT PLPTVPTDFL NKGKASMSFD  420
FDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-67B3 family protein