PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918590.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 278aa    MW: 30625.8 Da    PI: 9.3104
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.5e-13556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT+eE+e l+ +v+++G+g Wk I +        ++R+  ++k++w+++
   XP_023918590.1  5 KQKWTAEEEEALLGGVAKHGPGKWKNILKDPEfapflTNRSNIDLKDKWRNL 56
                     79************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MGNQKQKWTA EEEEALLGGV AKHGPGKWKN ILKDPEFAPF LTNRSNIDLK DKWRNLSVST  60
AGQGSKEKSR TPKIKAITAA PLPNVQHSAP AAPLLLTAPP DTVMDDAPNS THEGKNAPRY  120
NAMIFEAVST TIDTNGCDIG AIVHYIEQRQ EVPQNFRRLL SSRLRRLVAQ GKLEKVENCY  180
RIRKDTSLGT KTPAPKQKDV RPRQPLSSGL MTTSESVDDA ANAAAYRVAD AENKAYMAAE  240
AVKEAERISK MAEDSDSMLQ LVKDIYERCS RGEIVLLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-71MYB_related family protein