PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918434.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SBP

Protein Properties

Length: 888aa MW: 98267.2 Da PI: 7.3948

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.3	3.3e-41	161	238	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C++dls+ak+yhrrhkvCevhska+ +lv++++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ XP_023918434.1 161 MCQVDNCKEDLSNAKDYHRRHKVCEVHSKATRALVANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 238 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 888 aa Download sequence
MEEAGAQVAP PLFIHHHQTL ASRYSMAKKR DLPNYQAQQR FTQSPTGLQS TRDNWNPKVW 60 DWDSVGFVAK PVDAEELLRL GTPAVAAQME QKRKEESMAL TVDEEEDERL GLNLNLWGGS 120 NSVEEPGQDA AGHVSASRPN KRVRPGSPGA GAGGGGGNYP MCQVDNCKED LSNAKDYHRR 180 HKVCEVHSKA TRALVANQMQ RFCQQCSRFH PLSEFDEGKR SCRRRLAGHN RRRRKTQPED 240 VTSRLLLPGN RDNGTSANLD IVNLLTAIAR VQGKNQDKNI NCPSVPDRDQ LIQILGKINS 300 LPLPVDLAAK LPNLGSLNRK VPDHNSLEHQ SKLNGNPSSP STMDLLTGLS TTLATSAPDA 360 LTMLSQKSSQ SSDSEKTKMT SRDQATGSNL QKRPPLEFPS DGGARSSSSY QSPMEDSDGQ 420 VQEMPVNLPL QLFSSSPDND SPSKLASSRK YFSSDSSNPI EERSPSSSPP AVPKLFPMQH 480 KKETMKPEKM LISGGVNANV VASRARDCNR PFDLFRGSNT GGEAGSFQSF PYQAGYTSSG 540 SDHSPSSLNS DTQDRTGRIL FKLFDKDPSH FPGSLRTQIY NWLSNSPSEM ESYIRPGCVV 600 LSIYVSMSSA SWEQLEQNLL ERVNALVQSS DSDFWRSGRF IVHAGSQLAS HKDGKIHLCK 660 SWRTWSSPEL ILVSPLAVVS GQETSLLLKG RNLSNHGTKI HCTYMGGYTS KEITGSTYQD 720 TACDEINLVD FKIHNASPGV VGRCFIEVEN GFKGNCFPVI IADSIICKEL RLLESEFDLE 780 TRDCDLILED NTNDFGRPRS REAILHFLNE LGWLFQRKGN SSMLGGPDYS LSRLKFLLTF 840 SVERDCCALV KTLLDMLVER NLDGDELSKE SLETLSEIQL LNRAVKRR

Sequence ? help Back to Top

Protein Sequence Length: 888 aa Download sequence

MEEAGAQVAP PLFIHHHQTL ASRYSMAKKR DLPNYQAQQR FTQSPTGLQS TRDNWNPKVW  60
DWDSVGFVAK PVDAEELLRL GTPAVAAQME QKRKEESMAL TVDEEEDERL GLNLNLWGGS  120
NSVEEPGQDA AGHVSASRPN KRVRPGSPGA GAGGGGGNYP MCQVDNCKED LSNAKDYHRR  180
HKVCEVHSKA TRALVANQMQ RFCQQCSRFH PLSEFDEGKR SCRRRLAGHN RRRRKTQPED  240
VTSRLLLPGN RDNGTSANLD IVNLLTAIAR VQGKNQDKNI NCPSVPDRDQ LIQILGKINS  300
LPLPVDLAAK LPNLGSLNRK VPDHNSLEHQ SKLNGNPSSP STMDLLTGLS TTLATSAPDA  360
LTMLSQKSSQ SSDSEKTKMT SRDQATGSNL QKRPPLEFPS DGGARSSSSY QSPMEDSDGQ  420
VQEMPVNLPL QLFSSSPDND SPSKLASSRK YFSSDSSNPI EERSPSSSPP AVPKLFPMQH  480
KKETMKPEKM LISGGVNANV VASRARDCNR PFDLFRGSNT GGEAGSFQSF PYQAGYTSSG  540
SDHSPSSLNS DTQDRTGRIL FKLFDKDPSH FPGSLRTQIY NWLSNSPSEM ESYIRPGCVV  600
LSIYVSMSSA SWEQLEQNLL ERVNALVQSS DSDFWRSGRF IVHAGSQLAS HKDGKIHLCK  660
SWRTWSSPEL ILVSPLAVVS GQETSLLLKG RNLSNHGTKI HCTYMGGYTS KEITGSTYQD  720
TACDEINLVD FKIHNASPGV VGRCFIEVEN GFKGNCFPVI IADSIICKEL RLLESEFDLE  780
TRDCDLILED NTNDFGRPRS REAILHFLNE LGWLFQRKGN SSMLGGPDYS LSRLKFLLTF  840
SVERDCCALV KTLLDMLVER NLDGDELSKE SLETLSEIQL LNRAVKRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	883	888	RAVKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein