PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918432.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 766aa MW: 87400.1 Da PI: 5.9689

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.3	2e-31	84	171	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g+i++r+ vCs+eg+r+e ++ +++r+r+ tr+gCka+++vkk+++gkw v+kl++eHnHel+p XP_023918432.1 84 FYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRREGGEN--RSKRQRTITRVGCKAQMTVKKQSSGKWAVSKLVKEHNHELVP 171 9***************************************9998..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence
MDFEPLNIEN EVMEFDASGS MEDDTATLDL ENHDDDYERD YNDESFEGSN SSTSNVFLTH 60 NGEEPNLEPY EGMEFDSEQA ARIFYNSYAR RIGFSTRVSV YQRSRRDGSI ICRQIVCSRE 120 GFRREGGENR SKRQRTITRV GCKAQMTVKK QSSGKWAVSK LVKEHNHELV PPDKVHCLRS 180 HRHVSGPARS LIDTLQAAGM GPSGVMSVLI KESGGINNVG FTKVDCQNYM SSSRQRSLGS 240 GGQIVFDYLK QMQAEDPDFF CAVQGDFENL TGNIFWADPN SRMNYNYFGD TVTFDTTYRT 300 NRYRVPFAPF TGWNHHGQPV LFGCALLLNE SESSFVWLFQ TWLAAMSGRY PISITTDQDR 360 IIRAAVVQVF PETCHRFCKW NVFREAQEKL SDVYHARPNF EAEFQKCINV TETIDEFESC 420 WESLLQRYDL GDNEWLQSMY NARHRWVPVY LRDTFFGEMS INQGSDNINS YFDGYINAST 480 NVQVLIKQYE KAIASRYEKE VKADYDTINT LPVLKTPSPM EKQAANLYTR KIFMIFQEEL 540 VETLAYPATI IDDTGSETMY RVAKFGEDHK THFVRFNIFE KKASCSCQMF EFAGIICRHI 600 LAVFRVTNVL TLPPHYILKR WTRNAKSGVL LDQCTLGLPS DSQESSAARY DNLRQEAIKY 660 VEEGAESVPI YNVAMTALQE AAKKVAAAKK HGSGVHQSAL DNGSPQLQSY SLDQDKEIQA 720 LTAELENASQ QCEAYRAKLS AVLKNLEEQK LKISVKVQNV RLNLRS

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence

MDFEPLNIEN EVMEFDASGS MEDDTATLDL ENHDDDYERD YNDESFEGSN SSTSNVFLTH  60
NGEEPNLEPY EGMEFDSEQA ARIFYNSYAR RIGFSTRVSV YQRSRRDGSI ICRQIVCSRE  120
GFRREGGENR SKRQRTITRV GCKAQMTVKK QSSGKWAVSK LVKEHNHELV PPDKVHCLRS  180
HRHVSGPARS LIDTLQAAGM GPSGVMSVLI KESGGINNVG FTKVDCQNYM SSSRQRSLGS  240
GGQIVFDYLK QMQAEDPDFF CAVQGDFENL TGNIFWADPN SRMNYNYFGD TVTFDTTYRT  300
NRYRVPFAPF TGWNHHGQPV LFGCALLLNE SESSFVWLFQ TWLAAMSGRY PISITTDQDR  360
IIRAAVVQVF PETCHRFCKW NVFREAQEKL SDVYHARPNF EAEFQKCINV TETIDEFESC  420
WESLLQRYDL GDNEWLQSMY NARHRWVPVY LRDTFFGEMS INQGSDNINS YFDGYINAST  480
NVQVLIKQYE KAIASRYEKE VKADYDTINT LPVLKTPSPM EKQAANLYTR KIFMIFQEEL  540
VETLAYPATI IDDTGSETMY RVAKFGEDHK THFVRFNIFE KKASCSCQMF EFAGIICRHI  600
LAVFRVTNVL TLPPHYILKR WTRNAKSGVL LDQCTLGLPS DSQESSAARY DNLRQEAIKY  660
VEEGAESVPI YNVAMTALQE AAKKVAAAKK HGSGVHQSAL DNGSPQLQSY SLDQDKEIQA  720
LTAELENASQ QCEAYRAKLS AVLKNLEEQK LKISVKVQNV RLNLRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein