PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023918410.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 690aa MW: 76213.7 Da PI: 5.6872

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023918410.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.6	1.5e-24	187	239	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++l+Wt+ LH rF+ea++++ G +kA+Pktile+m+v gLt+ +v+SHLQkYRl XP_023918410.1 187 AKLVWTNSLHCRFLEAINHI-GLDKAVPKTILEIMNVWGLTRGNVASHLQKYRL 239 699***************.******************************7 PP
2	Myb_DNA-binding	24	9.2e-08	188	238	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT ++ ++++a++ G + +ktI + m+ g+t+ ++ s++qky+ XP_023918410.1 188 KLVWTNSLHCRFLEAINHIGLDkaVPKTILEIMNvWGLTRGNVASHLQKYR 238 678******************************9************7 PP
3	Response_reg	83.2	7.8e-28	6	112	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+ + + ++ +l+ +y ev +++++ +al++l+ +++Dl+++D+ mp m+Glel ke +ee klp+i+++a ++e+ +l+ l+ G+ XP_023918410.1 6 ILVVDDDATSLAIVSAMLRTLKY-EVVTVRNPMDALATLRMQKFDLVVTDLHMPVMNGLELQKEVEEEF-KLPVIMMSADDDESVILRSLECGVA 98 89*******************.*************************************9999.********************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +++Kp++p++l + XP_023918410.1 99 FYIVKPVSPKDLKN 112 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MVDIHILVVD DDATSLAIVS AMLRTLKYEV VTVRNPMDAL ATLRMQKFDL VVTDLHMPVM 60 NGLELQKEVE EEFKLPVIMM SADDDESVIL RSLECGVAFY IVKPVSPKDL KNVWQYAVAA 120 KRGKFIAIEE IKNIPAESSV VSFEDKKSAA SSVCQEKRSK KDSKRKGVPK MGKEDENEMN 180 QGVPKRAKLV WTNSLHCRFL EAINHIGLDK AVPKTILEIM NVWGLTRGNV ASHLQKYRLF 240 LKKVAEKGLC TSKGVSLRSS FASGLPTSHI FKKFRQNYPQ FPEQKQKRTS MLQPGFGSNF 300 MTLNGSILGG TPFNRASSSG AQFGYGESFN ALNIEPARFS TKHNASSSNF VPQLGLEQWR 360 SLNNLQQTLF GNRNNSLHQA NCPAFANNVG SNFPSLRDMT CGPMNNAKNG LVNTSNCNDK 420 YPQQTQPIRP HLLNGSLLNF DFETPGILNH RYIPDIKKNM GSLISSNAAP NIGYNNGVDT 480 GIQMSNREKL IGTSEKSFND NGTPNGPCNG FGMMNGHNDN IALATMGNET FGNNMDQGES 540 SSDGFEKANQ LLPWFNIVNQ QGNDLPILPT QSQQQPNIVN GGENDSSYDD LLNAISLMPN 600 LGEDDLNELF LEETYNQPPS QQQGGEEVPS EENPHVNEVQ ILEPSGSSNL EENAPLSEPT 660 FSQQQLVSSN DLYGMYQVEN NVNSPSKSQA

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MVDIHILVVD DDATSLAIVS AMLRTLKYEV VTVRNPMDAL ATLRMQKFDL VVTDLHMPVM  60
NGLELQKEVE EEFKLPVIMM SADDDESVIL RSLECGVAFY IVKPVSPKDL KNVWQYAVAA  120
KRGKFIAIEE IKNIPAESSV VSFEDKKSAA SSVCQEKRSK KDSKRKGVPK MGKEDENEMN  180
QGVPKRAKLV WTNSLHCRFL EAINHIGLDK AVPKTILEIM NVWGLTRGNV ASHLQKYRLF  240
LKKVAEKGLC TSKGVSLRSS FASGLPTSHI FKKFRQNYPQ FPEQKQKRTS MLQPGFGSNF  300
MTLNGSILGG TPFNRASSSG AQFGYGESFN ALNIEPARFS TKHNASSSNF VPQLGLEQWR  360
SLNNLQQTLF GNRNNSLHQA NCPAFANNVG SNFPSLRDMT CGPMNNAKNG LVNTSNCNDK  420
YPQQTQPIRP HLLNGSLLNF DFETPGILNH RYIPDIKKNM GSLISSNAAP NIGYNNGVDT  480
GIQMSNREKL IGTSEKSFND NGTPNGPCNG FGMMNGHNDN IALATMGNET FGNNMDQGES  540
SSDGFEKANQ LLPWFNIVNQ QGNDLPILPT QSQQQPNIVN GGENDSSYDD LLNAISLMPN  600
LGEDDLNELF LEETYNQPPS QQQGGEEVPS EENPHVNEVQ ILEPSGSSNL EENAPLSEPT  660
FSQQQLVSSN DLYGMYQVEN NVNSPSKSQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07210.1	6e-56	ARR-B family protein