PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918338.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 335aa    MW: 36163.1 Da    PI: 7.3859
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918338.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-1298142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
   XP_023918338.1  98 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 142
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGIRKSASM GNLSHYAGSG SGLNQNGSNT  60
PGSPGETPEH GAAADGYASE DFVPGSSSSC RERKKGVPWT EEEHRMFLLG LQKLGKGDWR  120
GIARNYVISR TPTQVASHAQ KYFIRQTNVS RRKRRSSLFD IIADESADTP MVPHDFLSVN  180
ESQAETQSNP PLPAPPALDE ECESMESINS SDGDPIPPKT ESSQPCYPVV YPAYVAPYFP  240
FPLPYWSGYN TPEATKKEET HEVLKPTAVH SKSPINVDEL VGMSKLSLGE SIGHAGPSSL  300
SLKLLEGSSR QSAFHANPAS GSSNINSSSS PIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-116MYB_related family protein