PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023918338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 335aa MW: 36163.1 Da PI: 7.3859 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 98 | 142 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar Rt+ q+ s+ qky XP_023918338.1 98 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 142 8*****************************89************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence |
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGIRKSASM GNLSHYAGSG SGLNQNGSNT 60 PGSPGETPEH GAAADGYASE DFVPGSSSSC RERKKGVPWT EEEHRMFLLG LQKLGKGDWR 120 GIARNYVISR TPTQVASHAQ KYFIRQTNVS RRKRRSSLFD IIADESADTP MVPHDFLSVN 180 ESQAETQSNP PLPAPPALDE ECESMESINS SDGDPIPPKT ESSQPCYPVV YPAYVAPYFP 240 FPLPYWSGYN TPEATKKEET HEVLKPTAVH SKSPINVDEL VGMSKLSLGE SIGHAGPSSL 300 SLKLLEGSSR QSAFHANPAS GSSNINSSSS PIHAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-116 | MYB_related family protein |