PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023918120.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 346aa    MW: 37651 Da    PI: 6.6613
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023918120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000452102481255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_023918120.1 210 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 248
                     6677889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MNRGVLQSAP VQQMMAGNPN CWNINNMRPP TQPASPFLPS PIFFPQYAPT SSSSSSSSIP  60
SWHDSQELPE SWSQLLLGGL VGEEDKDGMS QFQAAKKLEN WGEQLYSQAA NASVVSVKQE  120
NSVSNYVYGH GTEDFQPAKA TWSQVMPASS PNSSCVTSFN NNMLDFSSIK VDGRHPPPDR  180
SSECNSIANG GALKKARVQP SSTQPTFKVR KEKLGDRITA LHQLVSPFGK TDTASVLLEA  240
IGYIRFLQSQ IEALSLPYLG SGSGNMRQQQ QSVQGERNCL FPEDPGQLLN ENCIKRKGGP  300
EQDSHEEPKK DLRSRGLCLV PVSCTLQVGN DNGADYWAPA LGGGFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-104bHLH family protein