PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917882.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SBP

Protein Properties

Length: 533aa MW: 59251.3 Da PI: 6.6814

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.7	6.1e-42	182	257	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023917882.1 182 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 257 **************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MESWSYNSEG KGILFSDEMD FQIDGFARSR KTLMEWDNKH SYNFESNELG SDREVGESTE 60 FMELGFSDFV RKPFHGNQEV EMLSGEVGSG PSKRVVSPTC MITSNSCFGE VDSEAKLSSS 120 VMDACSQDSS LIDLKLGRLA DYEDAENSKL LKERPILSSS EGSSLLTKRA RKTSSYCQTA 180 FCQVYGCNKD LSSSKDYHKR HKVCDVHSKT AKVIVNGIEQ RFCQQCSRFH LLAEFDDGKR 240 SCRKRLAGHN ERRRKPQLDT LSGKSHKFLQ SYQGTRYLGT TMTKRTPYVF PDIFQSGVIY 300 PEKYEQANWL RHIKLEGESI CGPKSAIPIT SGQLLPKTFL HLHGIGKQCC SGVPSSGAEE 360 CAVAASTVQE LSGASISSCA LSLLSAQSQD PSNHLTGIPI ASPQVMQDGF AHHSVSQISD 420 KPLRVNSMEQ YGPNGLYSYG MNSLEIDKMG SVMLSDSDHA ADFQVHSNGI FQESDILNAK 480 YCPSPEHAPT VNLLQLSSHL QRVERQRNSN EVKQENEDFC YFPTTRAVCN PQG

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MESWSYNSEG KGILFSDEMD FQIDGFARSR KTLMEWDNKH SYNFESNELG SDREVGESTE  60
FMELGFSDFV RKPFHGNQEV EMLSGEVGSG PSKRVVSPTC MITSNSCFGE VDSEAKLSSS  120
VMDACSQDSS LIDLKLGRLA DYEDAENSKL LKERPILSSS EGSSLLTKRA RKTSSYCQTA  180
FCQVYGCNKD LSSSKDYHKR HKVCDVHSKT AKVIVNGIEQ RFCQQCSRFH LLAEFDDGKR  240
SCRKRLAGHN ERRRKPQLDT LSGKSHKFLQ SYQGTRYLGT TMTKRTPYVF PDIFQSGVIY  300
PEKYEQANWL RHIKLEGESI CGPKSAIPIT SGQLLPKTFL HLHGIGKQCC SGVPSSGAEE  360
CAVAASTVQE LSGASISSCA LSLLSAQSQD PSNHLTGIPI ASPQVMQDGF AHHSVSQISD  420
KPLRVNSMEQ YGPNGLYSYG MNSLEIDKMG SVMLSDSDHA ADFQVHSNGI FQESDILNAK  480
YCPSPEHAPT VNLLQLSSHL QRVERQRNSN EVKQENEDFC YFPTTRAVCN PQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	6e-53	SBP family protein