PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023917881.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 533aa MW: 59251.3 Da PI: 6.6814 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 133.7 | 6.1e-42 | 182 | 257 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls+ k+yh+rhkvC+vhsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_023917881.1 182 CQVYGCNKDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 257 **************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MESWSYNSEG KGILFSDEMD FQIDGFARSR KTLMEWDNKH SYNFESNELG SDREVGESTE 60 FMELGFSDFV RKPFHGNQEV EMLSGEVGSG PSKRVVSPTC MITSNSCFGE VDSEAKLSSS 120 VMDACSQDSS LIDLKLGRLA DYEDAENSKL LKERPILSSS EGSSLLTKRA RKTSSYCQTA 180 FCQVYGCNKD LSSSKDYHKR HKVCDVHSKT AKVIVNGIEQ RFCQQCSRFH LLAEFDDGKR 240 SCRKRLAGHN ERRRKPQLDT LSGKSHKFLQ SYQGTRYLGT TMTKRTPYVF PDIFQSGVIY 300 PEKYEQANWL RHIKLEGESI CGPKSAIPIT SGQLLPKTFL HLHGIGKQCC SGVPSSGAEE 360 CAVAASTVQE LSGASISSCA LSLLSAQSQD PSNHLTGIPI ASPQVMQDGF AHHSVSQISD 420 KPLRVNSMEQ YGPNGLYSYG MNSLEIDKMG SVMLSDSDHA ADFQVHSNGI FQESDILNAK 480 YCPSPEHAPT VNLLQLSSHL QRVERQRNSN EVKQENEDFC YFPTTRAVCN PQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 6e-53 | SBP family protein |