PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023917857.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | YABBY | ||||||||
Protein Properties | Length: 168aa MW: 18548 Da PI: 8.9074 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 146.8 | 2.2e-45 | 10 | 152 | 2 | 163 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 d + se++Cyv+CnfCnt+lav +P++ l+ +vtv+CGhC++l ++ + +q + +h l +++ +++++ +++s+s+s XP_023917857.1 10 DSVPPSEHLCYVRCNFCNTVLAVGIPFKRLLDTVTVKCGHCSNLSFISTRPPVQGQCP-DH--------SLSLQGF-CNDFRKV--HSSSSSSS- 91 667899************************************9866444433332222.22........2222222.2222222..22222222. PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ++++ +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa + XP_023917857.1 92 ------TSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 152 ......334556799999***********************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MNLEDKVSMD SVPPSEHLCY VRCNFCNTVL AVGIPFKRLL DTVTVKCGHC SNLSFISTRP 60 PVQGQCPDHS LSLQGFCNDF RKVHSSSSSS STSSEPLSPK APFVVKPPEK KHRLPSAYNR 120 FMKEEIQRIK AANPEIPHRE AFSTAAKNWA RYIPNSPAGS VSGSNNNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 5e-68 | YABBY family protein |