PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917856.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family YABBY
Protein Properties Length: 171aa    MW: 18933.4 Da    PI: 8.9047
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY152.34.3e-47101552163
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     d +  se++Cyv+CnfCnt+lav +P++ l+ +vtv+CGhC++l  ++ +  +q +   + l      +l+e++++  +++++ +  ++s+s+s 
  XP_023917856.1  10 DSVPPSEHLCYVRCNFCNTVLAVGIPFKRLLDTVTVKCGHCSNLSFISTRPPVQGQCPDHSL------SLQEKQGFC-NDFRKVH--SSSSSSS- 94 
                     667899*************************************8776555554443333222......233333322.2232222..2222222. PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                           ++++  +p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafs+aaknWa +
  XP_023917856.1  95 ------TSSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARY 155
                     ......334556799999***********************************************76 PP

Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MNLEDKVSMD SVPPSEHLCY VRCNFCNTVL AVGIPFKRLL DTVTVKCGHC SNLSFISTRP  60
PVQGQCPDHS LSLQEKQGFC NDFRKVHSSS SSSSTSSEPL SPKAPFVVKP PEKKHRLPSA  120
YNRFMKEEIQ RIKAANPEIP HREAFSTAAK NWARYIPNSP AGSVSGSNNN E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.17e-69YABBY family protein