PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917701.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 278aa    MW: 30517.4 Da    PI: 4.9932
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.8e-093983753
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHH CS
             HLH  7 erErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIks 53
                    ++E+rRR+++N  f  L ++lP +    s+K lsK  i+++  +++++
  XP_023917701.1 39 AIEKRRRQDMNRIFLDLARCLPRL---ASTKrLSKNLIVTECLRHLRQ 83
                    79*********************7...45555******9998888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MTPDANATAT STAATIKAKN KKQARKRPLP PAVTSRNLAI EKRRRQDMNR IFLDLARCLP  60
RLASTKRLSK NLIVTECLRH LRQQRNMCIA AGRGLRELLS AHNDMIAEVN TLRSQLQIPI  120
QNAPRPPSTA FLSLMDVENQ TYGEFPDGFT SPSATETQES QPLAVQRNAD ASLPGPPIAP  180
DLVDPAQTSA QAYAPNYLDG ALDAIPTASE HWQVQMPEHF LAPSNEEVAL ALDTDWWGLD  240
VSELESEIPQ IPPWDEACDD GLQGYSQGAF VPSPSAFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12545RKRPLPPAVTSRNLAIEKRRR