PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917341.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 351aa MW: 38515.2 Da PI: 7.2586

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g W++ + + g++R++k+c++rw +yl XP_023917341.1 14 KGAWTAEEDKKLLAYIQEHGEGGWRSLPDKAGLKRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	41.1	4.2e-13	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE+ +++++++ lG++ W+ I+r + gR+++++k+ w++ XP_023917341.1 67 RGKFSAEEEHKIIELHAVLGNR-WSIISRQLH-GRSDNEIKNIWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRIGCCDVE GLRKGAWTAE EDKKLLAYIQ EHGEGGWRSL PDKAGLKRCG KSCRLRWANY 60 LRPGIKRGKF SAEEEHKIIE LHAVLGNRWS IISRQLHGRS DNEIKNIWNS RLKKRLAKMG 120 INPVTHISHM PNNISKPRSK SNELDLNQHQ AGSSISISAP AQLLNKVAAK LVPSGFLDTL 180 KSWQYGQEKL TEGDESSTNN GNDNSGIGID ERCRIESPGT MNTSNSASTQ SHSKMASMSS 240 QTLLHDPSAN TCDIKVGNTC NPECTMWPSG NTLEMPRAAS TSSWVIDEIV TKPGVFHCSE 300 ENWQGISSVS IEDYSCGDGG IYDIVGIGGA YDIVSNIYTQ LPEECNGTII H

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRIGCCDVE GLRKGAWTAE EDKKLLAYIQ EHGEGGWRSL PDKAGLKRCG KSCRLRWANY  60
LRPGIKRGKF SAEEEHKIIE LHAVLGNRWS IISRQLHGRS DNEIKNIWNS RLKKRLAKMG  120
INPVTHISHM PNNISKPRSK SNELDLNQHQ AGSSISISAP AQLLNKVAAK LVPSGFLDTL  180
KSWQYGQEKL TEGDESSTNN GNDNSGIGID ERCRIESPGT MNTSNSASTQ SHSKMASMSS  240
QTLLHDPSAN TCDIKVGNTC NPECTMWPSG NTLEMPRAAS TSSWVIDEIV TKPGVFHCSE  300
ENWQGISSVS IEDYSCGDGG IYDIVGIGGA YDIVSNIYTQ LPEECNGTII H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	2e-64	MYB family protein