PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917226.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family bHLH
Protein Properties Length: 340aa    MW: 37770.6 Da    PI: 6.2498
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917226.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.57.4e-1653102255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + a+ L +++eY+++Lq
  XP_023917226.1  53 RSKHSVTEQRRRSKINERFQILRDLIPNS----DQKRDTASFLLEVIEYVQYLQ 102
                     899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MRTEKGNHQE DEEYEDEDFT SKKDATSSTP NNNNNNTTNN KDAKNNDKAS AIRSKHSVTE  60
QRRRSKINER FQILRDLIPN SDQKRDTASF LLEVIEYVQY LQERVHKYEG SYQGWSSEPT  120
KLMPWRNSHW RVQNFVGHPQ TIKNGSGLGT TFPGKFDENN VSITPTMLTS TQNPVESDPS  180
RDITCKPMDR QPELANKGLP LPIPLQANVP ISVRGDGVQA HPLQGLVSDA QSTQSPMTSE  240
TLNQQEELII EGGTISISSV YSQGLLNTLT QALQSAGVDL SQASVSVQID LGKRANRGMT  300
SGTSIAKDHE NPPSSHQAMT HLTDAGSRED SDQAQKRLRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-114bHLH family protein