PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023916957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ARR-B | ||||||||
Protein Properties | Length: 681aa MW: 74490.7 Da PI: 6.0158 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.3 | 8.2e-29 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_023916957.1 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 215 | 265 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_023916957.1 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP | |||||||
3 | Response_reg | 73 | 1.2e-24 | 35 | 143 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ + +l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + ++ + + + G XP_023916957.1 35 VLVVDDDPTCLVILEKMLRTCLY-EVTKCNRAEVALSMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKQVVMKGVTHG 127 89*********************.***************999999**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_023916957.1 128 ACDYLIKPVRIEALKN 143 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MNQSNCKGSM STASSSTNWK ANDVVPDQFP AGLRVLVVDD DPTCLVILEK MLRTCLYEVT 60 KCNRAEVALS MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKQVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KKKNEWKDLE QSGSVEEGDR QPKLSEDVDY 180 SSSANEGNWK NSKKRKDEEE ETEDRDDTST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQGM NNSFMSPQDA TFGAMSSLNG 300 LDLQTLSVTG QLPAQSLATL QAAGLGRSTT KSGIPMPLVD QRNLFSFENP KLRFGEGQQQ 360 QMSSNKPMNL LHGIPTTMEP KQLASLHQSA QSIGGMNMQV NTHGGQGSTL LMQMAQPQSR 420 GQILNESTSS HVPRLPSSIG QPIMTNGIAG GVIGRNGIGD NSRGTGYNQV PPSSSMLSFP 480 MNHTTELAGN SFPLGSTPGI SNVTSKGSFQ EEGNSEMKGS AGFVASYDIF NDLQQQHQHK 540 SHDWELQNVG LHFDASQNAN PIQGNLDVSP SVLVHQGYSS SQRSGQNRNA SAVGRAMFSG 600 VECVEQGNMQ NFSPHLNNLL VDNSVRVKAE TIPDANCQTT LFTEHFGQDD LMSALLKQQG 660 GIGTAETDFD LDGYSMDNIP V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 0.0 | ARR-B family protein |