PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916642.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 273aa MW: 31621.5 Da PI: 6.2438

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916642.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ l+++++++G +W++ ++ g+ R++k+c++rw +yl XP_023916642.1 14 KGPWTPEEDQVLINYIQLYGHSNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.8	3.9e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_023916642.1 67 RGNFSREEEDTIIKLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MVRAPCCEKM GLKKGPWTPE EDQVLINYIQ LYGHSNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SREEEDTIIK LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKQNQ 120 ANPETKRSSN NNISKYYHEA VHELELEPVN FSSHAKSESL EYRAVSPQEC SSDMSSVTMS 180 DNNNENKVCL KVESPRNFPE MDEKFWSELS TENSEVVMSE FSAVDGDAQL QFQFSPLTME 240 PIHGYGSNMH DSMDYFWFNL FNRAGELPEL PDV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKRLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	5e-82	MYB family protein