PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023916583.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 34991.4 Da PI: 6.5018 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.3 | 8.2e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++++ +G g+W+++++ g+ R++k+ ++rw +yl XP_023916583.1 14 RGLWSAEEDEKLINYISNYGHGCWRSVPKFAGLQRCGKSYRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 43.7 | 6.2e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rgr+++eE l+ ++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_023916583.1 67 RGRFSPEEAALITELQGILGNK-WAQIAKQLP-GRTDNEVKNFWNT 110 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGHHSCCDKK KVNRGLWSAE EDEKLINYIS NYGHGCWRSV PKFAGLQRCG KSYRLRWINY 60 LRPDLKRGRF SPEEAALITE LQGILGNKWA QIAKQLPGRT DNEVKNFWNT SIRKKLISYD 120 APAIATFLDV HFNGNSEEGL FSLNANPNWI LNSRQDQLYL PTPTPNLQGF DHGDLKLEQT 180 NYVANLVQYP PPMAPPSNSS SYDPLWSLGY LPHKNFDPNQ EHQNFSSSGA TQHYIGDKLI 240 GPSIATPNYD EDPLTVPMIP NPCEIINGNL CGMSYSCASL ELDPLARFPY FPVGCDYPYD 300 LHVPNNHME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 2e-70 | MYB family protein |