PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916289.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 275aa    MW: 29917.2 Da    PI: 4.4588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916289.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-1867117155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p  ng  k+ +lg+f ta +Aa a+++a+  ++g
  XP_023916289.1  67 CHYRGVRQRT-WGKWVAEIREP--NG-GKKLWLGTFETAIDAASAYDKAASTMYG 117
                     79*****999.**********9..33.5**********************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MVMDNPDQKK RKRKNSRDSV SVAETLAKWK EKNTAQFLSC GAPKVQAKGS KKGCCMKGKG  60
GPENSLCHYR GVRQRTWGKW VAEIREPNGG KKLWLGTFET AIDAASAYDK AASTMYGSSA  120
RLNFPDITSH TSPMESVKDC CWTSSESVPY SMGSPVGSES TTAANPSEFC ADEDALYYPV  180
TEADMPSLVG TEAEGESTGV SEFCADEGTL YYPVTEAKDE STNYFGDNGQ ENLLDCSENE  240
NFMYEIMALL NDPVGNTDSV LGFGYDADQL GLGKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1914KKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-28ERF family protein