PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023916216.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 216aa MW: 23100.3 Da PI: 4.7642 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.4 | 4.9e-15 | 56 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++y+G r +++g+Wv+eIr p r +r++lg+f t+e+Aa+a++ a+++l+g XP_023916216.1 56 PKYRGAR--SRSGKWVSEIRQP-----RkpTRIWLGTFQTPEMAAAAYDVAALALKG 105 5788885..678*********8.....448************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MANVSQNDTS TPANVRREET TLTCNTSSST TTTTSTIPVS EGFSGQSGSP SPTQNPKYRG 60 ARSRSGKWVS EIRQPRKPTR IWLGTFQTPE MAAAAYDVAA LALKGPDTAL NFPNSILSYP 120 IPASMSPNDI RAAAACAAED RLRRSSEGSS TGQETTRRRR SEEEFVDEDA VLNMPNLLVD 180 MAEGMLVSPP RIQSKSSSDE SGGDGNGDGD GLWSYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 2e-33 | ERF family protein |