PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023916188.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 243aa MW: 25988.4 Da PI: 5.7812 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.6 | 7.3e-14 | 77 | 125 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G ++++g+Wv+eIr p++ ++r++lg++ t e+Aa a++ a+++l+g XP_023916188.1 77 KYRGA--RSRSGKWVSEIRQPRK---TTRIWLGTYPTREMAAVAYDVAALALKG 125 67777..4678*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MPKNRANVRQ NNPYTHANVR REESTLNSNT TGAISASSSE TNTNPTTTAA TSTSPISESE 60 GSSGQSGSSS STANPKKYRG ARSRSGKWVS EIRQPRKTTR IWLGTYPTRE MAAVAYDVAA 120 LALKGPSTVL NFPNLILWYP IPASLNPSDI RAAAASAAEA MMQRSSEGSS GSSSSTSGHE 180 TAHRNRTEEE YVDEEELLNM PNLLVEMAEG MLLSPPRIQS KSSSDESGCD GNGDGDGLWS 240 YAY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 7e-34 | ERF family protein |