PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915990.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 397aa MW: 44002.9 Da PI: 5.4292

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915990.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.1	6.5e-31	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 lp+G++F+P+d el+ e+L++k+ + + +e+i++++ i++++P+dLp +k++ ++++fF+++ ++ya+g+rk+r+ XP_023915990.1 55 LPVGVKFEPSDAELL-EHLAAKCGVGNsnphlfI--DEFIPTLEgdkgICYSHPEDLP-GAKKDGSSVHFFHRTTNAYASGQRKRRKiqsehsss 145 799**********.999999876665666432..334554423344******.55677899***************845555533 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l XP_023915990.1 146 EGPVRWHKTGKTKPLME-NGLQKGCKKIMVLYksSKKGSKPDKSNWVMHQYHL 197 22557********.999*******4434666778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MARAWLINSR ALARKVRNVT CSAAHQIKDC GANRECPNCH CRIDNSDVSP EWPGLPVGVK 60 FEPSDAELLE HLAAKCGVGN SNPHLFIDEF IPTLEGDKGI CYSHPEDLPG AKKDGSSVHF 120 FHRTTNAYAS GQRKRRKIQS EHSSSEGPVR WHKTGKTKPL MENGLQKGCK KIMVLYKSSK 180 KGSKPDKSNW VMHQYHLGTE ENEKEGEFVV SKIFYQQQKQ TENNDGNLVV EDSDIMTLRT 240 SPRTPKANPP NPPRPGISVQ SDDVGDNNDL SSLQEAEFVS EASHAPPPDI KAEDNMDYPA 300 WLAGESQAVE NSDLNCMNDS LLCREIFDNY APLNNSGLNH ISFTGSSSNT NEMTLNNSAS 360 SGIPDLENIY LDTPPDFQLA DLQFGSQDSV LSWMDRL

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MARAWLINSR ALARKVRNVT CSAAHQIKDC GANRECPNCH CRIDNSDVSP EWPGLPVGVK  60
FEPSDAELLE HLAAKCGVGN SNPHLFIDEF IPTLEGDKGI CYSHPEDLPG AKKDGSSVHF  120
FHRTTNAYAS GQRKRRKIQS EHSSSEGPVR WHKTGKTKPL MENGLQKGCK KIMVLYKSSK  180
KGSKPDKSNW VMHQYHLGTE ENEKEGEFVV SKIFYQQQKQ TENNDGNLVV EDSDIMTLRT  240
SPRTPKANPP NPPRPGISVQ SDDVGDNNDL SSLQEAEFVS EASHAPPPDI KAEDNMDYPA  300
WLAGESQAVE NSDLNCMNDS LLCREIFDNY APLNNSGLNH ISFTGSSSNT NEMTLNNSAS  360
SGIPDLENIY LDTPPDFQLA DLQFGSQDSV LSWMDRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-95	NAC family protein