PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915703.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 296aa MW: 31503.9 Da PI: 7.1796

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.8	1.8e-11	11	55	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT e d+ + +a + + + +W++Ia+ ++ g+tl+++k+++ XP_023915703.1 11 EWTREQDKAFENALATYSEDasdRWEKIAADVP-GKTLEEIKHHYE 55 7******************************.********96 PP
2	Myb_DNA-binding	42	2.2e-13	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky XP_023915703.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 166 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MTVDEAGSSS EWTREQDKAF ENALATYSED ASDRWEKIAA DVPGKTLEEI KHHYELLVDD 60 LNQIESGCVP LPAYNSTSEG STSHGGDEGT GKKGGHLGHY NSESNHGSKV SKSDQERRKG 120 IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVTRTPTQVA SHAQKYFIRL NSMNKDRRRS 180 SIHDITSVGN GDVSAPQGPI TGQTNGSPAG GSSGKSTKQP PQPPSGPPGV GMYGAPTIGQ 240 PIGGPLVSAV GTPVNLPTTA HMAYGVRAPV PGAMVSGAPM NMATMAYPMP HTSAHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	1e-121	MYB family protein