PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023915624.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family HB-other
Protein Properties Length: 349aa    MW: 38954.6 Da    PI: 4.7736
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023915624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.26.8e-09283330653
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                     +++k q+e+Le+++ +++ p+ +++    + ++L+ ++V  WF  +Ra
  XP_023915624.1 283 RLKKVQVETLERVYGRTKRPTNAMISSVVHVTNLPRKRVVKWFEDKRA 330
                     57899******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGFALSAHSS IMALQIECFS SSLSDRLLVG QGHPSRPIHL NLPRFPPSCR SVLALARRRN  60
PTSSSSSSSS KKNKKSLRHK EPAKEDDIDE DAFEALFSQL EEDLKNEDPS LDGGDDEISE  120
EDLAMLVQEL AEALGDDDIP MSDSSADDTE SGNIAEADED KEEEEEEEEE EEERPVKLRN  180
WQLRRLASAL KAGRRKTSIK NLAAEVCLDR AVVLELLRDP PPNLLMMSAA LPDEPAPTLS  240
LSVPEPKPME TAHSEPSVHT EESGTKLQAP VHVLQHKWSA QKRLKKVQVE TLERVYGRTK  300
RPTNAMISSV VHVTNLPRKR VVKWFEDKRA EDGVPDQHPP YQRSVPETV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.12e-75HB-other family protein