PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023915521.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 148aa MW: 16608.6 Da PI: 5.9584 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 50.8 | 4e-16 | 12 | 105 | 5 | 95 |
NF-YB 5 drflPianvsrimkkvlPana...kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 ++lP + v r++k+ l +++ + kda e + fi ++++ a+d c++ kr+tin+dd+l al ++ f +++ plk+ l+++r+ ++ XP_023915521.1 12 AEELPRTIVRRVVKEKLCNDCddmSVHKDALLAFSESARIFIHYLSATANDICKESKRQTINADDVLTALQEIEFSHFLGPLKASLHEFRQKNA 105 56799999*********876522269999999**********************************************************9765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 148 aa Download sequence |
MESENQKVIS EAEELPRTIV RRVVKEKLCN DCDDMSVHKD ALLAFSESAR IFIHYLSATA 60 NDICKESKRQ TINADDVLTA LQEIEFSHFL GPLKASLHEF RQKNAGKKAG AAKEKEEKKK 120 RKLEELSHDS GGGERVENED NQDGTGHA |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 113 | 122 | KEKEEKKKRK |
2 | 118 | 123 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27470.1 | 3e-39 | NF-YB family protein |