PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915297.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 345aa MW: 39199.6 Da PI: 7.8881

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.1	1.2e-51	53	177	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv+eyL kkv++ + +l + evd++k+ePwd+p+++ + k+wyf+++rd+kyatg r+nrat+sgyWkatgkd+++++ XP_023915297.1 53 LPPGFRFHPRDEELVCEYLMKKVTNCDPSL---MIEVDLNKCEPWDIPETACVGGKDWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSIVR- 143 79*********************99777...789********7777799**********************************9. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +g+lvg++ktLvfy+grapkg+kt+Wvmhe+rle XP_023915297.1 144 RGSLVGMRKTLVFYQGRAPKGRKTEWVMHEFRLE 177 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MFIYTPTSPP SLRSQTEKNS HTLSSFTCWF SLLFISLSLC DKMSNISMVE AKLPPGFRFH 60 PRDEELVCEY LMKKVTNCDP SLMIEVDLNK CEPWDIPETA CVGGKDWYFY TQRDRKYATG 120 LRTNRATASG YWKATGKDRS IVRRGSLVGM RKTLVFYQGR APKGRKTEWV MHEFRLEGPL 180 GPSKISSPKE DWVLCRVFYK NREVAAKPSM GNCYDDTGSS TLPALMDSYI NFDQPKAHAD 240 EYEQVPCFSI FNQNQNQTSP FFTHMTNMEP NLPKINTETT FKGIPNNIGT YLDPFSCDNK 300 VLKAVLSQLS NMDSNPNMKG SPSLGEGSSE SYLSEVGMPN IWSHY

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MFIYTPTSPP SLRSQTEKNS HTLSSFTCWF SLLFISLSLC DKMSNISMVE AKLPPGFRFH  60
PRDEELVCEY LMKKVTNCDP SLMIEVDLNK CEPWDIPETA CVGGKDWYFY TQRDRKYATG  120
LRTNRATASG YWKATGKDRS IVRRGSLVGM RKTLVFYQGR APKGRKTEWV MHEFRLEGPL  180
GPSKISSPKE DWVLCRVFYK NREVAAKPSM GNCYDDTGSS TLPALMDSYI NFDQPKAHAD  240
EYEQVPCFSI FNQNQNQTSP FFTHMTNMEP NLPKINTETT FKGIPNNIGT YLDPFSCDNK  300
VLKAVLSQLS NMDSNPNMKG SPSLGEGSSE SYLSEVGMPN IWSHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-118	NAC family protein