PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023915056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 727aa MW: 79850.4 Da PI: 5.6417 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.4 | 1.6e-20 | 59 | 114 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k XP_023915056.1 59 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 114 688999***********************************************999 PP | |||||||
2 | START | 225 | 2.3e-70 | 248 | 467 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEE CS START 1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetle 83 ela +a++el+++a+ +ep+W++ ++ n+de++++f+++ + ++ ea+r+++vv+m++ +lve+l+d++ qW++ + +a+tle XP_023915056.1 248 ELAVAAMEELIRMAQMGEPLWMTNLdgtSMINEDEYIRTFPRGIGprpsgFKCEASRETAVVIMNHINLVEILMDVS-QWSTVFSgivsRAMTLE 341 57899*************************************999********************************.***************** PP EECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS START 84 vissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvd 171 v+s+g galq+m+ae+q++splvp R++++vRy++q+ +g+w++vdvS+d+ ++ p vR++++pSg+li++++ng+skvtwveh++ XP_023915056.1 342 VLSTGvagnynGALQVMTAEFQVPSPLVPtRESYYVRYCKQHADGTWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHIE 432 ***********************************************************995....***************************** PP --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 172 lkgrlphwllrslvksglaegaktwvatlqrqcek 206 +++r +h+l+++lv+sg a+gak+wvatl+rqce+ XP_023915056.1 433 VDDRGVHNLYKQLVSSGNAFGAKRWVATLDRQCER 467 *********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 727 aa Download sequence |
MFQPNVMDGQ LHQLDMAQNT SESDLARIRD DEFDSATKSG SENHEGASGD DQDPRPNKKK 60 RYHRHTQHQI QEMEAFFKEC PHPDDKQRKE LSRELGLEPL QVKFWFQNKR TQMKTQHERH 120 ENTNLRTENE KLRADNMRYR EALSNASCPN CGGPTAIGEM SFDEHHLRLE NARLREEIDR 180 ISAIAAKYVG KPVVNYPLLS PPVPTRPLDL GVGSFGGQPG IGGEMYGAGD LLRTINAPTE 240 ADKPMIIELA VAAMEELIRM AQMGEPLWMT NLDGTSMINE DEYIRTFPRG IGPRPSGFKC 300 EASRETAVVI MNHINLVEIL MDVSQWSTVF SGIVSRAMTL EVLSTGVAGN YNGALQVMTA 360 EFQVPSPLVP TRESYYVRYC KQHADGTWAV VDVSLDNLRP SPAVRCRRRP SGCLIQEMPN 420 GYSKVTWVEH IEVDDRGVHN LYKQLVSSGN AFGAKRWVAT LDRQCERLAS AMATSIPTGD 480 IGVITNQEGR KSMLKLAERM VISFCAGVSA STTHTWTTLS GTGADDVRVM TRKSIDDPGR 540 PPGIVLSAAT SFWLPVPPKR VFDFLRDENS RSEWDILSNG GVVQEMAHIA NGRETGNCVS 600 LLRVNSANSS QSNMLILQES CTDPTASFVI YAPVDIVAMN LVLNGGDPDY VALLPSGFAI 660 LPDGTTAHEG GIGEATTSGG SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IACTVERIKA 720 SLSCENA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05230.4 | 0.0 | HD-ZIP family protein |