PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914987.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family E2F/DP
Protein Properties Length: 395aa    MW: 43528.3 Da    PI: 5.2564
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP85.83.3e-27128193171
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                     r+++sL+llt+kfl+l++++++g+++ln+ a+ L   +v  ++RRiYDi+NVLe+++liek++kn+irwkg
  XP_023914987.1 128 RYDSSLGLLTKKFLSLIQEAKDGTLDLNHTAEIL---QV--QKRRIYDITNVLEGIGLIEKTSKNHIRWKG 193
                     6899******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MANDPNPPNQ QPGSQFHTHN HNPYAAAAFQ GVQPFSFFAT NPFPSYSHAA ASVAHSATFA  60
QLALRQMNEL DECEAQTSGQ AAIPRQTELA NDLPLKPASR TGGKHQTQSK APKQSKSGTQ  120
KTDIANCRYD SSLGLLTKKF LSLIQEAKDG TLDLNHTAEI LQVQKRRIYD ITNVLEGIGL  180
IEKTSKNHIR WKGYGDVGQQ ELDGQVAALK AENASLYLEE CSLDEFIRQK LELLNALKEG  240
ENYQKYLFLT GEDIMSLPCF QNQTLIAIKA PQASNIEVPD PNEDIGFHQR QCNMTIRSTT  300
GPIDLYLLSK FDSQHESTSV KQAKSPDSSA GNSDHCKEED AVQPPQVNQN NSSEAFSSPA  360
SEVSGIQKII PSDSGIDNDY WFRTDPKVST TDLWA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.16e-90E2F/DP family protein