PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023914964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 234aa MW: 26159.5 Da PI: 5.4436 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.7 | 2.5e-17 | 60 | 110 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr +k++ +Wv+e+r+p +k+ r++lg+f tae+Aa+a++ a+ +l+g XP_023914964.1 60 PVYRGVR-KKNSEKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 110 68****9.6669******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MNLIRHSSAP QYLTQFDIGS SKLESGSTSM VNLSEDEIML ASRNPKKRDG RKKFKETRHP 60 VYRGVRKKNS EKWVCEVREP NKKSRIWLGT FPTAEMAARA HDVAAIALRG RSACLNFADS 120 TWRLPVPKST AAKDIQRAAA EAAELFRLAE LDGVSREELS QGLENATSTT TVTTTSEAVE 180 TKVEDVFFMD DETVFDMPGL LTDMADGMLL SPPHCYNEDD KETDSNMALW SYSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 4e-68 | ERF family protein |