PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023914927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 165aa MW: 18556.3 Da PI: 9.2038 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 45.6 | 1.4e-14 | 89 | 127 | 2 | 41 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +kk+C+Ck+skClk+YCeCfa g +C+ CkC +C N+ e XP_023914927.1 89 RKKHCTCKHSKCLKLYCECFAGGIYCDG-CKCANCYNDVE 127 689*************************.********987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 165 aa Download sequence |
MEETENIDFP PKRPRSVGAT RKTVTEASVA FPRKNRIRQL DFTEFPVKPI SVVPHSRLPP 60 RIPLSTINSE SPRSRPQLNI NGSNDTPKRK KHCTCKHSKC LKLYCECFAG GIYCDGCKCA 120 NCYNDVENED VRIAAIEGIL ERNPSAFKPK IANSPLKTLD NRVDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G29000.1 | 1e-37 | CPP family protein |