PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914740.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 524aa MW: 58130.3 Da PI: 5.9007

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914740.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5.3e-09	355	396	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++WT++E +++++a +++G++ ++ I+++++ +t+ q+k +++ XP_023914740.1 355 DPWTEDETDRFYEALRMFGTD-FDIISKMFP-PKTRMQVKKKFN 396 69*****************.*******.789999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MISSAVGGKR AAPKTAVRRR PPTKSQHVSL ADDTPIEAER SAPLVPTTAP TRDATSVSAA 60 LSEPPYVSVG TPLQSEAAPR VETQREVSAT APVISDSPAA RDGHDQSDRN QQLHVLDSGA 120 DGLPISVSRV ESQDCFSATG QNKRKRAPGE TGTLPGNDTS RIASLDVEAP KPRRPKRKAK 180 KTKTTSEGKE RADESKEVPG VDPANLTMFQ LSYNNRHGKS SERERKMAEI DWVEVGRKRQ 240 EEVDKIRAGQ NVDRSNADQV VESTESANGQ ASVTPAARND DEGTGIGLRI VNGQIVEDET 300 TLSIDQNAQA QANATNDDEV EEENDLAERL NRTTFLNNRR RDPRERIPVY KSKSDPWTED 360 ETDRFYEALR MFGTDFDIIS KMFPPKTRMQ VKKKFNREER IDLPRINAAL LGKENKPMDL 420 EHYAREVGED VSVYMKYESY EHASQIIRES MKDREEELAA AVKENTETQR QQDIQQKQQE 480 AAEKKKMEKK EKAAARRANK GRKPGVGTMG GGGPEDVVVE TTES

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MISSAVGGKR AAPKTAVRRR PPTKSQHVSL ADDTPIEAER SAPLVPTTAP TRDATSVSAA  60
LSEPPYVSVG TPLQSEAAPR VETQREVSAT APVISDSPAA RDGHDQSDRN QQLHVLDSGA  120
DGLPISVSRV ESQDCFSATG QNKRKRAPGE TGTLPGNDTS RIASLDVEAP KPRRPKRKAK  180
KTKTTSEGKE RADESKEVPG VDPANLTMFQ LSYNNRHGKS SERERKMAEI DWVEVGRKRQ  240
EEVDKIRAGQ NVDRSNADQV VESTESANGQ ASVTPAARND DEGTGIGLRI VNGQIVEDET  300
TLSIDQNAQA QANATNDDEV EEENDLAERL NRTTFLNNRR RDPRERIPVY KSKSDPWTED  360
ETDRFYEALR MFGTDFDIIS KMFPPKTRMQ VKKKFNREER IDLPRINAAL LGKENKPMDL  420
EHYAREVGED VSVYMKYESY EHASQIIRES MKDREEELAA AVKENTETQR QQDIQQKQQE  480
AAEKKKMEKK EKAAARRANK GRKPGVGTMG GGGPEDVVVE TTES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	143	183	KRKRAPGETGTLPGNDTSRIASLDVEAPKPRRPKRKAKKTK
2	173	181	RRPKRKAKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	2e-09	MYB_related family protein