PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914497.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 1791aa MW: 202115 Da PI: 4.977

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914497.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.8	8.9e-19	44	99	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le+++ ++ yps+++r++L++klgL++rq ++WF+ rR k+kk XP_023914497.1 44 PKRQMKTPFQLETLEKAYSMETYPSEATRADLSEKLGLSDRQLQMWFCHRRLKDKK 99 69****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1791 aa Download sequence
MEAASEEENQ NQNNEENNNN NNNNSNSNGK INNNNNSSEG QSKPKRQMKT PFQLETLEKA 60 YSMETYPSEA TRADLSEKLG LSDRQLQMWF CHRRLKDKKD GSAKKPRKSA STAVVAAMPE 120 SPVDELRGGG EPGSDYGSGS GSGSGSSPLG RSEFRNAVSR SVLDDVPIMR RYYESPQSIL 180 ELRAIACVEA QLGEPLREDG PILGVEFDSL PPDAFGAPIA VSEQPKRLGH PYESKLYEQR 240 DVKSYKATQR ALHEYPFLHD QPSARPDVFG QVSQSHFHDS MVDAPTARTS SVVLGNEQLP 300 RVHGVQGHVP RVRIFPQQEK QALALSSPPR DDERVPQRES LTNVRVSSQF GDHPIIGPED 360 SYVLSDGQIS HSDAILRMEK KRKSEEARIA KEVEAHEIRI RKELEKQDIL RRKNEERMKK 420 EMEKQDRERK KEEERLMRER QREEERSKRE QKREMERREK FLQKENLRAE KRRQKEELRK 480 EKEAVRRKAA IEKATARRIA RESMELIEDE QLELMELAVA SKGLSSMIHL DHDTLQNIES 540 FRDLLIAFPP KSVKLKKPFA VQPWINSEEN IGNLLMVWRF LITFADVLKL WPFTLDEFVQ 600 AFHDYDSRLL GEIHVALLKL IIKDIEDVAR TPSTGLIVNQ NSAANPGGGH PQIVEGAYAW 660 GFDIRNWQRH LNPLTWPEIF RQLALSAGFG PQLKKRSIRW SYSHENDEGK GCEDIVSTLR 720 SGSAAENAFA IMQEKGLLLP RRSRHRLTPG TVKFAAFHVL SLEGGKGLTV LELADKIQKS 780 GLRDLTTSKT PEASISVALT RDAKLFERIA PSTYRVRAAF RKDPADAEAI LSAARKKIQI 840 FENGFLAEDA EYVERDDAED VLRDDAEDVL RDDTEDVERD EDSESDDVDE DPEVDDFATL 900 STGNKISSPY GEVKTCSGSG KEDLCNDVAL NLQTELEKDF SSIPLVGPKD ENCPSTATEL 960 CVVGGGIGAV NQENMEIDES KSGESWIQGL TEGDYSDLSV EERLNALVTL IGVANEGNSI 1020 RGVLEDRMES ANALKKQMWA EAQLDKSRLK EEIISKTDFP SSITGSRADM QFLSSAVEGS 1080 QSPFPNVDNQ LIEASPSTAE NQNPLVSQGI QDHLNNVPTE RTPGQDFPTG PDNFLIQQLG 1140 YASKRSRLQL KSYIAHRAEE MYVYRSLPLG QDRRRNRYWQ FVASASSNDP GSGRIFIELH 1200 DGNWRLIDSE EAFDALLISL DARGIRESHL RLMLQKIESS FKENVQRNMP SANVVSRSGS 1260 GTVVKNEAEE MNSSPDYPAG FDSPSSTVCG LNSDMLETSS SFRIELGRNE TEKKAALNRY 1320 QDFQKWTWKE CFNSVTLCAM KYGKKRCAQL LGVCDFCLNS YLSEDSHCLS CHRNFGTSNN 1380 DFNFSEHAIQ CEEKRKIHMG SFQILDSSLP LGTRLLKSLL AFIEVSVPPE ALQSYWMGDH 1440 RKTWVVKLNA SSSVEDLLQM LTLFERVLKR DFLSSNFATT EELLGSCTQS GSSLHDFSDP 1500 RSIPVLPWIP QTMTAVALRL FELDASVIYL KQEKPEPFED KEVREYILPS RYAPFDNVKE 1560 VELTELNHDE KNFTELKSNR NSYKRGRGGR EQGRGKKWQK KARVSHSDVG RRNVKSNENL 1620 IQGLRQQGQR TYGQGSGRGR RTVRRRRVEK RAVDERLLSH RADSYRSKSI DESPRNLGEE 1680 WDDERISMHP MEDPNFNDAE AVDSDDNAQA VEYEHGNWEI GFTSASNGWR EDLNEASDED 1740 VDASEDDNVI EEAGDEDSEA DVDMSDGSDG IANRVGNDEG TESAESDDYS D

Sequence ? help Back to Top

Protein Sequence Length: 1791 aa Download sequence

MEAASEEENQ NQNNEENNNN NNNNSNSNGK INNNNNSSEG QSKPKRQMKT PFQLETLEKA  60
YSMETYPSEA TRADLSEKLG LSDRQLQMWF CHRRLKDKKD GSAKKPRKSA STAVVAAMPE  120
SPVDELRGGG EPGSDYGSGS GSGSGSSPLG RSEFRNAVSR SVLDDVPIMR RYYESPQSIL  180
ELRAIACVEA QLGEPLREDG PILGVEFDSL PPDAFGAPIA VSEQPKRLGH PYESKLYEQR  240
DVKSYKATQR ALHEYPFLHD QPSARPDVFG QVSQSHFHDS MVDAPTARTS SVVLGNEQLP  300
RVHGVQGHVP RVRIFPQQEK QALALSSPPR DDERVPQRES LTNVRVSSQF GDHPIIGPED  360
SYVLSDGQIS HSDAILRMEK KRKSEEARIA KEVEAHEIRI RKELEKQDIL RRKNEERMKK  420
EMEKQDRERK KEEERLMRER QREEERSKRE QKREMERREK FLQKENLRAE KRRQKEELRK  480
EKEAVRRKAA IEKATARRIA RESMELIEDE QLELMELAVA SKGLSSMIHL DHDTLQNIES  540
FRDLLIAFPP KSVKLKKPFA VQPWINSEEN IGNLLMVWRF LITFADVLKL WPFTLDEFVQ  600
AFHDYDSRLL GEIHVALLKL IIKDIEDVAR TPSTGLIVNQ NSAANPGGGH PQIVEGAYAW  660
GFDIRNWQRH LNPLTWPEIF RQLALSAGFG PQLKKRSIRW SYSHENDEGK GCEDIVSTLR  720
SGSAAENAFA IMQEKGLLLP RRSRHRLTPG TVKFAAFHVL SLEGGKGLTV LELADKIQKS  780
GLRDLTTSKT PEASISVALT RDAKLFERIA PSTYRVRAAF RKDPADAEAI LSAARKKIQI  840
FENGFLAEDA EYVERDDAED VLRDDAEDVL RDDTEDVERD EDSESDDVDE DPEVDDFATL  900
STGNKISSPY GEVKTCSGSG KEDLCNDVAL NLQTELEKDF SSIPLVGPKD ENCPSTATEL  960
CVVGGGIGAV NQENMEIDES KSGESWIQGL TEGDYSDLSV EERLNALVTL IGVANEGNSI  1020
RGVLEDRMES ANALKKQMWA EAQLDKSRLK EEIISKTDFP SSITGSRADM QFLSSAVEGS  1080
QSPFPNVDNQ LIEASPSTAE NQNPLVSQGI QDHLNNVPTE RTPGQDFPTG PDNFLIQQLG  1140
YASKRSRLQL KSYIAHRAEE MYVYRSLPLG QDRRRNRYWQ FVASASSNDP GSGRIFIELH  1200
DGNWRLIDSE EAFDALLISL DARGIRESHL RLMLQKIESS FKENVQRNMP SANVVSRSGS  1260
GTVVKNEAEE MNSSPDYPAG FDSPSSTVCG LNSDMLETSS SFRIELGRNE TEKKAALNRY  1320
QDFQKWTWKE CFNSVTLCAM KYGKKRCAQL LGVCDFCLNS YLSEDSHCLS CHRNFGTSNN  1380
DFNFSEHAIQ CEEKRKIHMG SFQILDSSLP LGTRLLKSLL AFIEVSVPPE ALQSYWMGDH  1440
RKTWVVKLNA SSSVEDLLQM LTLFERVLKR DFLSSNFATT EELLGSCTQS GSSLHDFSDP  1500
RSIPVLPWIP QTMTAVALRL FELDASVIYL KQEKPEPFED KEVREYILPS RYAPFDNVKE  1560
VELTELNHDE KNFTELKSNR NSYKRGRGGR EQGRGKKWQK KARVSHSDVG RRNVKSNENL  1620
IQGLRQQGQR TYGQGSGRGR RTVRRRRVEK RAVDERLLSH RADSYRSKSI DESPRNLGEE  1680
WDDERISMHP MEDPNFNDAE AVDSDDNAQA VEYEHGNWEI GFTSASNGWR EDLNEASDED  1740
VDASEDDNVI EEAGDEDSEA DVDMSDGSDG IANRVGNDEG TESAESDDYS D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	100	RRLKDKKD
2	380	406	KKRKSEEARIAKEVEAHEIRIRKELEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein