PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023914496.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HB-other | ||||||||
Protein Properties | Length: 1792aa MW: 202243 Da PI: 4.9923 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.8 | 8.9e-19 | 44 | 99 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le+++ ++ yps+++r++L++klgL++rq ++WF+ rR k+kk XP_023914496.1 44 PKRQMKTPFQLETLEKAYSMETYPSEATRADLSEKLGLSDRQLQMWFCHRRLKDKK 99 69****************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1792 aa Download sequence |
MEAASEEENQ NQNNEENNNN NNNNSNSNGK INNNNNSSEG QSKPKRQMKT PFQLETLEKA 60 YSMETYPSEA TRADLSEKLG LSDRQLQMWF CHRRLKDKKD GSAKKPRKSA STAVVAAMPE 120 SPVDELRGGG EPGSDYGSGS GSGSGSSPLG RSEFRNAVSR SVLDDVPIMR RYYESPQSIL 180 ELRAIACVEA QLGEPLREDG PILGVEFDSL PPDAFGAPIA VSEQPKRLGH PYESKLYEQR 240 DVKSYKATQR ALHEYPFLHD QPSARPDVFG QVSQSHFHDS MVDAPTARTS SVVLGNEQLP 300 RVHGVQGHVP RVRIFPQQEK QALALSSPPR DDERVPQRES LTNVRVSSQF GDHPIIGPED 360 SYVLSDGQIS HSDAILRMEK KRKSEEARIA KEVEAHEIRI RKELEKQDIL RRKNEERMKK 420 EMEKQDRERK KEEERLMRER QREEERSKRE QKREMERREK FLQKENLRAE KRRQKEELRK 480 EKEAVRRKAA IEKATARRIA RESMELIEDE QLELMELAVA SKGLSSMIHL DHDTLQNIES 540 FRDLLIAFPP KSVKLKKPFA VQPWINSEEN IGNLLMVWRF LITFADVLKL WPFTLDEFVQ 600 AFHDYDSRLL GEIHVALLKL IIKDIEDVAR TPSTGLIVNQ NSAANPGGGH PQIVEGAYAW 660 GFDIRNWQRH LNPLTWPEIF RQLALSAGFG PQLKKRSIRW SYSHENDEGK GCEDIVSTLR 720 SGSAAENAFA IMQEKGLLLP RRSRHRLTPG TVKFAAFHVL SLEGGKGLTV LELADKIQKS 780 GLRDLTTSKT PEASISVALT RDAKLFERIA PSTYRVRAAF RKDPADAEAI LSAARKKIQI 840 FENGFLAEDA EYVERDDAED VLRDDAEDVL RDDTEDVERD EDSESDDVDE DPEVDDFATL 900 STGNKISSPY GEVKTCSGSG KEDLCNDVAL NLQTELEKDF SSIPLVGPKD ENCPSTATEL 960 CVVGGGIGAV NQENMEIDES KSGESWIQGL TEGDYSDLSV EERLNALVTL IGVANEGNSI 1020 RGVLEDRMES ANALKKQMWA EAQLDKSRLK EEIISKTDFP SSITGSRADM QFLSSAVEGS 1080 QSPFPNVDNQ LIEASPSTAE NQNPLVSQGI QDHLNNVPTE RTPGQDFPTG PDNFLIQQLG 1140 YASKRSRLQL KSYIAHRAEE MYVYRSLPLG QDRRRNRYWQ FVASASSNDP GSGRIFIELH 1200 DGNWRLIDSE EAFDALLISL DARGIRESHL RLMLQKIESS FKENVQRNMP SANVVSRSGS 1260 GTVVKNEAEE MNSSPDYPAG FDSPSSTVCG LNSDMLETSS SFRIELGRNE TEKKAALNRY 1320 QDFQKWTWKE CFNSVTLCAM KYGKKRCAQL LGVCDFCLNS YLSEDSHCLS CHRNFGTSNN 1380 DFNFSEHAIQ CEEKRKIHMG SFQILDSSLP LGTRLLKSLL AFIEVSVPPE ALQSYWMGDH 1440 RKTWVVKLNA SSSVEDLLQM LTLFERVLKR DFLSSNFATT EELLGSCTQS GSSLHDFSDP 1500 RSIPVLPWIP QTMTAVALRL FELDASVIYL KQEKPEPFED KEVREYIKLP SRYAPFDNVK 1560 EVELTELNHD EKNFTELKSN RNSYKRGRGG REQGRGKKWQ KKARVSHSDV GRRNVKSNEN 1620 LIQGLRQQGQ RTYGQGSGRG RRTVRRRRVE KRAVDERLLS HRADSYRSKS IDESPRNLGE 1680 EWDDERISMH PMEDPNFNDA EAVDSDDNAQ AVEYEHGNWE IGFTSASNGW REDLNEASDE 1740 DVDASEDDNV IEEAGDEDSE ADVDMSDGSD GIANRVGNDE GTESAESDDY SD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 100 | RRLKDKKD |
2 | 380 | 406 | KKRKSEEARIAKEVEAHEIRIRKELEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28420.1 | 0.0 | HB-other family protein |