PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023914482.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 282aa    MW: 30771.8 Da    PI: 7.0006
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023914482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA565.5e-18230266135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt++  Tp++Rrgp+g+ktLCnaCGl++++kg+
  XP_023914482.1 230 CRHCGTSEksTPMMRRGPEGPKTLCNACGLMWASKGT 266
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDIHEDNVR MHMSEAQHPT QFQYEHHGLH HMSNGNVNGM DDNHHHDNGN VNGSGGGGNE  60
GYEGDVPSDA GNLSDNRSAM VDQVGGDIGD QLTLSFQGQV YVFDSVSPEK VQAVLLLLGG  120
REVPPNMPAI PATIHNNNQV GISGTPQRLS VPQRNASLAR FREKRKERNF DKKIRYTVRK  180
EVALRMQRNK GQFTSSKSNN DDSASAVTSW GSDESWGPDG NGSQHQEIVC RHCGTSEKST  240
PMMRRGPEGP KTLCNACGLM WASKGTLRDL SRAAPKAGQN SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-112GATA family protein