PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914444.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

C2H2

Protein Properties

Length: 547aa MW: 60543.4 Da PI: 7.5332

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.2e-05	409	437	2	23
EET..TTT....EEESSHHHHHHHHHH.T CS zf-C2H2 2 kCp..dCg....ksFsrksnLkrHirt.H 23 Cp dC+ k F+rk+nL+ H+r+ H XP_023914444.1 409 MCPvaDCKrhsgKGFTRKENLHEHMRRvH 437 599999999999***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MVNDQDEVVV PYQYSVSAEQ YLRNLQARRG SHQSDDNGNR GGDGGRSGRA MQSQPFQQEF 60 VPDHVSSWVE HRHPQAGQHR HAAHAVSSTV TPIYDQGTSS TPIIPPSTAT SHLTDHWLPQ 120 ENFDATSTSD YHQIHPGQAS ADVLPDWTFD LGQDGRSHLP QASPPQPPPS SRQTPVIRLQ 180 TAGLPTFSQP QDTTYHSATS AVSSASSLYH SDDFHTRARN NTYSGRVYNH NNLSPHSPLP 240 RAMSQEISSA VMHTPVSSIS PQPHSHSDAH TMSQLVRELV EEASRKRSFS EMSQNGRPQM 300 HPVEHPHSRA VSVGSAAQGE ASPAADQDSP RGSRSFKRSD PPTNAEGKYC CNFSNDCSAL 360 TFDRKCEWRP YRCQDPLCAK LQGFTYSGGL LRHEREVHNK HGGPKEQLMC PVADCKRHSG 420 KGFTRKENLH EHMRRVHENK THGVQSPNAI ASLQVNLDGL QGVGENPDAS APREMTDMVG 480 PDDLVEPLHF SKRQRSGVPD TLEISVNNID ALQHQLKRLR EEKRRKRQAT KDAGRGRDGT 540 AARTGEL

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MVNDQDEVVV PYQYSVSAEQ YLRNLQARRG SHQSDDNGNR GGDGGRSGRA MQSQPFQQEF  60
VPDHVSSWVE HRHPQAGQHR HAAHAVSSTV TPIYDQGTSS TPIIPPSTAT SHLTDHWLPQ  120
ENFDATSTSD YHQIHPGQAS ADVLPDWTFD LGQDGRSHLP QASPPQPPPS SRQTPVIRLQ  180
TAGLPTFSQP QDTTYHSATS AVSSASSLYH SDDFHTRARN NTYSGRVYNH NNLSPHSPLP  240
RAMSQEISSA VMHTPVSSIS PQPHSHSDAH TMSQLVRELV EEASRKRSFS EMSQNGRPQM  300
HPVEHPHSRA VSVGSAAQGE ASPAADQDSP RGSRSFKRSD PPTNAEGKYC CNFSNDCSAL  360
TFDRKCEWRP YRCQDPLCAK LQGFTYSGGL LRHEREVHNK HGGPKEQLMC PVADCKRHSG  420
KGFTRKENLH EHMRRVHENK THGVQSPNAI ASLQVNLDGL QGVGENPDAS APREMTDMVG  480
PDDLVEPLHF SKRQRSGVPD TLEISVNNID ALQHQLKRLR EEKRRKRQAT KDAGRGRDGT  540
AARTGEL