PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023914433.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

HB-other

Protein Properties

Length: 572aa MW: 63117.1 Da PI: 9.1845

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023914433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	21.8	3.3e-07	73	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR + ++e +Le++++++++p++++r eL k + L e+ V qNrR+ ++ XP_023914433.1 73 RTKRKRTSPEDQAILEAAYARDPKPDKAKRLELVKVVALGEKEV----QNRRQSSRR 125 678999999999********************************....578877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MCLAHHHHHH HHHHHHHKGS TLVRPASMST APEIPETRPS PTVPSEGFTS IQDPSTKVSG 60 TSSPIVHDQP LGRTKRKRTS PEDQAILEAA YARDPKPDKA KRLELVKVVA LGEKEVQNRR 120 QSSRRKCRPL LPHEIAQYHL SRTAASGYSD TVDCAEIDRS NINSQTRAPQ ETDKRHVGDH 180 DQFPCVRVIN GGLEGPDHVS VCEERAVLST PASASKAMTE AIANPPESVS SHVMPVAASL 240 VSSEGDVQSS QGQSTPIGYF ANRRSEASFS SLRSLHSKDD PFMNLKTDPH PDDFDSHAAE 300 LTRKKPPRVH LSMSSEGKAT VTTKDDTSPS PARAKQPIRY SAGGIQNAEL QDKSNAFELE 360 RKPLQRSGSG RSRDSRAWEF WCDKDSRTEL ECRAEKEASG SAADAIGLLR SSSGRSILGP 420 LANKRNPTLL RDTSETKKPR LGPVKRPLLQ RASTSFGRLQ GKPTHRKQAR PSLKYSESAV 480 SIYIPGNDSD KENWSPERNK SIAQDKESWN ELGQGPVLKA TEVRERKVDI HNDPEADSEL 540 AHFMRSGRKS VSSEDDLDCV QGLLSLSQGN WR

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MCLAHHHHHH HHHHHHHKGS TLVRPASMST APEIPETRPS PTVPSEGFTS IQDPSTKVSG  60
TSSPIVHDQP LGRTKRKRTS PEDQAILEAA YARDPKPDKA KRLELVKVVA LGEKEVQNRR  120
QSSRRKCRPL LPHEIAQYHL SRTAASGYSD TVDCAEIDRS NINSQTRAPQ ETDKRHVGDH  180
DQFPCVRVIN GGLEGPDHVS VCEERAVLST PASASKAMTE AIANPPESVS SHVMPVAASL  240
VSSEGDVQSS QGQSTPIGYF ANRRSEASFS SLRSLHSKDD PFMNLKTDPH PDDFDSHAAE  300
LTRKKPPRVH LSMSSEGKAT VTTKDDTSPS PARAKQPIRY SAGGIQNAEL QDKSNAFELE  360
RKPLQRSGSG RSRDSRAWEF WCDKDSRTEL ECRAEKEASG SAADAIGLLR SSSGRSILGP  420
LANKRNPTLL RDTSETKKPR LGPVKRPLLQ RASTSFGRLQ GKPTHRKQAR PSLKYSESAV  480
SIYIPGNDSD KENWSPERNK SIAQDKESWN ELGQGPVLKA TEVRERKVDI HNDPEADSEL  540
AHFMRSGRKS VSSEDDLDCV QGLLSLSQGN WR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	101	KRKRTSPEDQAILEAAYARDPKPDKAK