PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023914281.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 203aa MW: 23162.1 Da PI: 4.6306 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104.4 | 1.5e-32 | 8 | 128 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk.dkevls 94 lppGf+F Ptdeelv ++L +k++ +++ ++i+++d++ ++Pw+++ k+ ++ + +yfFs++ + +n +tk+gyW ++g d+++++ XP_023914281.1 8 LPPGFHFCPTDEELVLHFLLRKASLLPCHP-DIIPDLDLCLHDPWEFNGKALTSGSVYYFFSNKVT-------ENWITKNGYWMESGIiDEPIVT 94 79*************************999.99**************9666666777888887654.......56799*********8799**** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 g++vg+kk Lvfy g+ap g++tdW+m+ey+l XP_023914281.1 95 GAGNKVGIKKYLVFYIGEAPGGVETDWIMQEYHL 128 9*******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGDGSVNLPP GFHFCPTDEE LVLHFLLRKA SLLPCHPDII PDLDLCLHDP WEFNGKALTS 60 GSVYYFFSNK VTENWITKNG YWMESGIIDE PIVTGAGNKV GIKKYLVFYI GEAPGGVETD 120 WIMQEYHLCN HDLRGALHNR RGKRKIDCSK WVLCRVYERK GNFAQWFCNS DDEDNGTELS 180 SPDEMFLSAV DDEFDDTSFP KQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 6e-60 | NAC family protein |