PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023914121.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 321aa MW: 36425.1 Da PI: 6.8656 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.1 | 1.7e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W++ ++ g+ R++k+c++rw++yl XP_023914121.1 14 RGLWSPEEDEKLINYITAYGHGCWSSLPKLAGLQRCGKSCRLRWLNYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 40.1 | 8.6e-13 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg+++++E l++++ lG++ W+ I++ ++ gRt++++k++w+ XP_023914121.1 67 RGSFSPQEAALIIELQGILGNK-WAQISKQLP-GRTDNEVKNFWN 109 899*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MRNHSCCNKQ KVKRGLWSPE EDEKLINYIT AYGHGCWSSL PKLAGLQRCG KSCRLRWLNY 60 LKPDLKRGSF SPQEAALIIE LQGILGNKWA QISKQLPGRT DNEVKNFWNS SIKKKLISQN 120 VHAITTSPDM HYNGNSEEGF FSLNANPNWI LSSQQYQLYL PTPTPMLHGF DHGDLKLDQT 180 NYVANLVQFL TPPPMAPPSN SSFYDPLWSV GYQPHEQFDP NQELRNFSTS GATQHYIGDK 240 LIGPSITAPH YDEDSLSSMI PKPCENIGSN CCGMPYLCAS QDLDPLARLP YFPASFDYPH 300 DPYVHNNHMD YMDMPSCHHL T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 2e-74 | MYB family protein |