PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913946.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 373aa MW: 41397.1 Da PI: 4.8181

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913946.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35	4.3e-11	18	116	11	127
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105 dee+++ L k +g +l+ +vik++d y+++P+ Lp ++ w+ +++ k+ + g+Wk +g+ +v+s +++++gl++t XP_023913946.1 18 DEEVIWT-LFKFKQGCPLPR-NVIKDIDPYDAHPEFLP------DRTWFLGHSE-VKT--------FNDYGIWKVKGTASNVFS-DSTTTGLRTT 94 7888866.444556667777.89************9......4556443333.322........3357**********.999*** PP NAM 106 LvfykgrapkgektdWvmheyr 127 L fy+ +ap+ + t+ vm+ey XP_023913946.1 95 LEFYDSQAPHKRITNRVMQEYC 116 *******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSHPAAPLPS DLESNCPDEE VIWTLFKFKQ GCPLPRNVIK DIDPYDAHPE FLPDRTWFLG 60 HSEVKTFNDY GIWKVKGTAS NVFSDSTTTG LRTTLEFYDS QAPHKRITNR VMQEYCILQE 120 GHSEGSNVKE TSTLCIIFSD GEQNQNHVKQ SELGSTDTAS ENHIHPTRSI VPNTNNSIGQ 180 SSSSQPQASE DDDIVMLGLT EHQNLHEIDY PPEGDFLELE DLLDDPASPS SSESSCVTMS 240 SDECFDSLAL LQELKPENNQ NGAGCKFSVS APVKPNEVKV LPATAGSLDR DREKMLTPSA 300 ILKTDSSTPE SAVRCQVNRI QKPNFRNEGP SSNSHNVTPP FSGHNFLAAD KEKMAPVVKK 360 KKCWKYLLCF MSF

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSHPAAPLPS DLESNCPDEE VIWTLFKFKQ GCPLPRNVIK DIDPYDAHPE FLPDRTWFLG  60
HSEVKTFNDY GIWKVKGTAS NVFSDSTTTG LRTTLEFYDS QAPHKRITNR VMQEYCILQE  120
GHSEGSNVKE TSTLCIIFSD GEQNQNHVKQ SELGSTDTAS ENHIHPTRSI VPNTNNSIGQ  180
SSSSQPQASE DDDIVMLGLT EHQNLHEIDY PPEGDFLELE DLLDDPASPS SSESSCVTMS  240
SDECFDSLAL LQELKPENNQ NGAGCKFSVS APVKPNEVKV LPATAGSLDR DREKMLTPSA  300
ILKTDSSTPE SAVRCQVNRI QKPNFRNEGP SSNSHNVTPP FSGHNFLAAD KEKMAPVVKK  360
KKCWKYLLCF MSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	7e-11	NAC family protein