PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023913916.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 243aa MW: 27875.2 Da PI: 6.3738 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152 | 2.9e-47 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrF Pt+eelv++yL++k+egk+ ++++vi+ + iy++ePw+Lpk +++a++++w+fF++r++++a+g r++r+t+sgyWkatg+ XP_023913916.1 4 LPPGFRFYPTEEELVSFYLHNKLEGKRPDVKRVIPVISIYDIEPWHLPKlsgeMCQADTEQWFFFTPRQEREARGGRPSRTTESGYWKATGSPGY 98 79****************************99****************667766667888*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+ XP_023913916.1 99 VYSSDNRVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135 ***********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEQLPPGFRF YPTEEELVSF YLHNKLEGKR PDVKRVIPVI SIYDIEPWHL PKLSGEMCQA 60 DTEQWFFFTP RQEREARGGR PSRTTESGYW KATGSPGYVY SSDNRVIGVK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEEVP SSSSAVVPKL RHEFSLCRVY VVSGSLRAFD RRPEMSTRET 180 PQLGDNEAAT SSQNTTMVEK TSSSETSHSG GDHVDLPEID GFNWGINDGL EQPLWEWEQL 240 NWP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-102 | NAC family protein |